RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
NEK4-201ENST00000233027 C3P1Q6ZMU1 363 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 DPY19L4Q7Z388 723 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 LAX1Q8IWV1 398 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 ZNF417Q8TAU3 575 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 LKAAEAR1Q8TD35 194 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
NEK4-201ENST00000233027 FANCFQ9NPI8 374 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 SLC6A5Q9Y345 797 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 V9GY05 133 aa12.56□□□□□ -0.4
NEK4-201ENST00000233027 C1SP09871 688 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 BMP1P13497 986 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 TIMP2P16035 220 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 CEBPBP17676 345 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 RPS25P62851 125 aaKnown RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 OR1Q1Q15612 314 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 SYT3Q9BQG1 590 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 B4GALT7Q9UBV7 327 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 PCDHGA6Q9Y5G7 932 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 NUDT21O43809 227 aaKnown RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 P04436 131 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ACP2P11117 423 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 MLLT11Q13015 90 aaPredicted RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 LYPD4Q6UWN0 246 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 TMEM102Q8N9M5 508 aaPredicted RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 SENP5Q96HI0 755 aaPredicted RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 MYADMQ96S97 322 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 NDUFAF4Q9P032 175 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 NAP1L6A6NFF2 107 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 RAC2P15153 192 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 AGAP6Q5VW22 663 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 APOOLQ6UXV4 268 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 B3GLCTQ6Y288 498 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 TRAPPC6BQ86SZ2 158 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 OR7G2Q8NG99 324 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ZNF480Q8WV37 535 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 AGAP4Q96P64 663 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 INTS14Q96SY0 518 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 QRSL1Q9H0R6 528 aaKnown RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 POLR1CO15160 346 aaPredicted RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 GABRB3P28472 473 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 CASP3P42574 277 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 CDK3Q00526 305 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 SPOCK1Q08629 439 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ERV3-1Q14264 604 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 SLC5A12Q1EHB4 618 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 FRMPD2BQ6IN97 320 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 BORAQ6PGQ7 559 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 SLC39A5Q6ZMH5 540 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 SGPP2Q8IWX5 399 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 ACBD4Q8NC06 268 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 TFAP2AP05549 437 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 CRABP1P29762 137 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 RABIFP47224 123 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 SUOXP51687 545 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 GAB1Q13480 694 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
NEK4-201ENST00000233027 NHSL2Q5HYW2 709 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 IL23AQ9NPF7 189 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 KCNIP1Q9NZI2 227 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
NEK4-201ENST00000233027 GAAP10253 952 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 CYBAP13498 195 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PRKACAP17612 351 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 AOAHP28039 575 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 TBPL2Q6SJ96 375 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PM20D2Q8IYS1 436 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 ZNF679Q8IYX0 411 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 CPPED1Q9BRF8 314 aaPredicted RBP12.54□□□□□ -0.4
NEK4-201ENST00000233027 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 ARHGAP33O14559 1287 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 SRPX2O60687 465 aaPredicted RBP12.54□□□□□ -0.4
NEK4-201ENST00000233027 PROS1P07225 676 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PLXDC1Q8IUK5 500 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 DTD2Q96FN9 168 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 CASD1Q96PB1 797 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 PRAF2O60831 178 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 HOXB9P17482 250 aaPredicted RBP12.54□□□□□ -0.4
NEK4-201ENST00000233027 IRF4Q15306 451 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 MARCH8Q5T0T0 291 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 SIMC1Q8NDZ2 872 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 STEAP2Q8NFT2 490 aa12.54□□□□□ -0.4
NEK4-201ENST00000233027 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms