RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 GUSBP08236 651 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 LINGO3P0C6S8 592 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 UBTFL6P0CB48 400 aaPredicted RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 PEPDP12955 493 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 IL11P20809 199 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 CHRNB4P30926 498 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 PGM1P36871 562 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 CCR4P51679 360 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 CLDN20P56880 219 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 FOXF1Q12946 379 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 SKP2Q13309 424 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 FGFBP1Q14512 234 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 RPS26P11Q5JNZ5 115 aaPredicted RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 RIPPLY2Q5TAB7 128 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 AP1ARQ63HQ0 302 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 SP5Q6BEB4 398 aaPredicted RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 DLEU7Q6UYE1 221 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 LRRC74BQ6ZQY2 392 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 LACC1Q8IV20 430 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 GTPBP8Q8N3Z3 284 aaPredicted RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 C9orf106Q8NAJ2 232 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 OR5W2Q8NH69 310 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 ZPLD1Q8TCW7 415 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 SLC38A5Q8WUX1 472 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 ASB5Q8WWX0 329 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 MAL2Q969L2 176 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 RNF145Q96MT1 663 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 LAT2Q9GZY6 243 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 IKZF5Q9H5V7 419 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 TMEM185BQ9H7F4 350 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 CALHM2Q9HA72 323 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 SAR1AQ9NR31 198 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 P2RX2Q9UBL9 471 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 LEF1Q9UJU2 399 aaPredicted RBP11.44□□□□□ -0.58
LSM5-201ENST00000223084 NDUFAF1Q9Y375 327 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 CACNA1DQ01668 2161 aa11.44□□□□□ -0.58
LSM5-201ENST00000223084 AGAP5A6NIR3 686 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 CD8B2A6NJW9 211 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 EFNA2O43921 213 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 SNRPB2P08579 225 aaKnown RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 TFPTP0C1Z6 253 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 ZNF17P17021 662 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 PSMA4P25789 261 aaKnown RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 CEACAM8P31997 349 aaPredicted RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 TIMP3P35625 211 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 MAGEA8P43361 318 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 AGFG1P52594 562 aaKnown RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 SEC24CP53992 1094 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 SUMO3P55854 103 aaPredicted RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 KCNJ10P78508 379 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 PLAURQ03405 335 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 KLF10Q13118 480 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 BCL2A1Q16548 175 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 ZNF787Q6DD87 383 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 EIF3MQ7L2H7 374 aaKnown RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 ADGRE4PQ86SQ3 457 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 DHDDSQ86SQ9 333 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 LSRQ86X29 649 aaPredicted RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 MEIOBQ8N635 442 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 LILRB4Q8NHJ6 448 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 FBXO27Q8NI29 283 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 CNOT9Q92600 299 aaKnown RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 ZBTB8AQ96BR9 441 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 TMEM19Q96HH6 336 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 THUMPD3Q9BV44 507 aaKnown RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 TRIM8Q9BZR9 551 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 MTHFD2LQ9H903 347 aaPredicted RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 KLF2Q9Y5W3 355 aaPredicted RBP11.43□□□□□ -0.58
LSM5-201ENST00000223084 AP4B1Q9Y6B7 739 aa11.43□□□□□ -0.58
LSM5-201ENST00000223084 C7orf72A4D263 438 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 MBD3L4A6NDZ8 208 aaPredicted RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 MBD3L3A6NE82 208 aaPredicted RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 MBD3L5A6NJ08 208 aaPredicted RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 FBP2O00757 339 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 ANGPT2O15123 496 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 TGM6O95932 706 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 IL2RAP01589 272 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 PRKCAP17252 672 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 RPS4Y1P22090 263 aaKnown RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 SHC1P29353 583 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 RYKP34925 604 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 ZNF136P52737 540 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 CRISP3P54108 245 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 FADDQ13158 208 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 CBFBQ13951 182 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 NFYCQ13952 458 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 SELPLGQ14242 412 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 QPRTQ15274 297 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 SF3B4Q15427 424 aaKnown RBP eCLIP11.42□□□□□ -0.581e-6■□□□□ 10.3
LSM5-201ENST00000223084 RUNDC3AQ59EK9 446 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 CHMP1BQ7LBR1 199 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 GGNQ86UU5 652 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 VRK2Q86Y07 508 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 FAM71CQ8NEG0 241 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 TOR1AIP2Q8NFQ8 470 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms