RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HOXC5Q00444 222 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 ZSWIM7Q19AV6 140 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 OR2M3Q8NG83 312 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 OR52E4Q8NGH9 312 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 TTTY12Q9BZ98 90 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 IGLV3-32A0A0A0MS00 114 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 FAM166BA8MTA8 275 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 ADAM11O75078 769 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 RFPL3SP0C7P2 107 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 PRG2P13727 222 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 OR1E2P47887 323 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 P2RX1P51575 399 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 RGS8P57771 180 aaPredicted RBP24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 CACNA1BQ00975 2339 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 MTX3Q5HYI7 312 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 SPATA24Q86W54 205 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 GRAMD2AQ8IUY3 354 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 LACC1Q8IV20 430 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 FADS6Q8N9I5 356 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 TEX19Q8NA77 164 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 ZFP62Q8NB50 900 aaPredicted RBP24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 EXOSC3Q9NQT5 275 aaKnown RBP24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 OLAHQ9NV23 265 aa24.81■■□□□ 1.56
CHMP4B-201ENST00000217402 TCRBV5S2A0A599 114 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 CDC40O60508 579 aaKnown RBP eCLIP24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 RASAL1O95294 804 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 C8BP07358 591 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 TOR1AIP2Q8NFQ8 470 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 OR4D11Q8NGI4 311 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 ARHGDIGQ99819 225 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 HHATLQ9HCP6 504 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 C15orf41Q9Y2V0 281 aa24.8■■□□□ 1.56
CHMP4B-201ENST00000217402 CFAP73A6NFT4 308 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 AP3D1O14617 1153 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 NRF1Q16656 503 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 IFI44LQ53G44 452 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 CARM1Q86X55 608 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 OR5W2Q8NH69 310 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 SLC9A8Q9Y2E8 581 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 TCEA1P23193 301 aaKnown RBP24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 GDF1P27539 372 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 MSX1P28360 303 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 TOMM20Q15388 145 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 ZNF550Q7Z398 422 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 RBM45Q8IUH3 476 aaKnown RBP24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 ZNF440Q8IYI8 595 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 Q8NA96 180 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 OR6T1Q8NGN1 323 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 PYURFQ96I23 114 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 ZNF703Q9H7S9 590 aaPredicted RBP24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 PTGES2Q9H7Z7 377 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 B4GALT7Q9UBV7 327 aa24.79■■□□□ 1.56
CHMP4B-201ENST00000217402 TLN1Q9Y490 2541 aaKnown RBP24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 ANKUB1A6NFN9 424 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 AQP12BA6NM10 295 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 CBR3O75828 277 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 PPIAP62937 165 aaKnown RBP24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 EPS8Q12929 822 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 CBFBQ13951 182 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 RNFT1Q5M7Z0 435 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 ARSKQ6UWY0 536 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 AQP12AQ8IXF9 295 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 GEMIN6Q8WXD5 167 aaKnown RBP24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 WBP1Q96G27 269 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 TAAR6Q96RI8 345 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 SEPHS2Q99611 448 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 PRR14Q9BWN1 585 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 DKKL1Q9UK85 242 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 VDAC3Q9Y277 283 aa24.78■■□□□ 1.56
CHMP4B-201ENST00000217402 GLSO94925 669 aaPredicted RBP24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 LINGO3P0C6S8 592 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 ZNF24P17028 368 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 ACAA2P42765 397 aaKnown RBP24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 ZNF136P52737 540 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 SUMO3P55854 103 aaPredicted RBP24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 KLRB1Q12918 225 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 TOMM34Q15785 309 aaPredicted RBP24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 NPTX1Q15818 432 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 TMEM251Q8N6I4 163 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 C1GALT1C1Q96EU7 318 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 ATRXP46100 2492 aa24.77■■□□□ 1.56
CHMP4B-201ENST00000217402 ACOT7O00154 380 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 DPP4P27487 766 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 MAGEA5P43359 124 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 SLC6A8P48029 635 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 ZNF41P51814 821 aaPredicted RBP24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 CCNIQ14094 377 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 KPNB1Q14974 876 aaKnown RBP24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 RPUSD3Q6P087 351 aaKnown RBP24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 DEF8Q6ZN54 512 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 SLC22A16Q86VW1 577 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 ZNF563Q8TA94 476 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 GPR119Q8TDV5 335 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 SLC35B4Q969S0 331 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 ZNF524Q96C55 264 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 SLC47A1Q96FL8 570 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 UBQLN3Q9H347 655 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 NTNG1Q9Y2I2 539 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 BSNQ9UPA5 3926 aa24.76■■□□□ 1.55
CHMP4B-201ENST00000217402 TRAPPC6AO75865 159 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms