RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
SRP54-201ENST00000216774 FHL5Q5TD97 284 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 CEACAM19Q7Z692 300 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 OR4E2Q8NGC2 313 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ABHD4Q8TB40 342 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ZFPM2Q8WW38 1151 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SNAPC3Q92966 411 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SLC22A18Q96BI1 424 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 BPIFA2Q96DR5 249 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 TM4SF19Q96DZ7 209 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SMIM10Q96HG1 83 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 IFT27Q9BW83 186 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SLC17A9Q9BYT1 436 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 DIABLOQ9NR28 239 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 DUSP22Q9NRW4 184 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 HAO2Q9NYQ3 351 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 FBXL21Q9UKT6 434 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 BAIAP2Q9UQB8 552 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 CACNG2Q9Y698 323 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 MDC1Q14676 2089 aaKnown RBP12.34□□□□□ -0.43
SRP54-201ENST00000216774 TBC1D3EA0A087X179 549 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 A0A0G2JK05 382 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 C7orf66A4D0T2 115 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 BTN3A3O00478 584 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 DHFRP00374 187 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SBK2P0C263 348 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 LAMP2P13473 410 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 FUT1P19526 365 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 PTNP21246 168 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 BMP8BP34820 402 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 WASP42768 502 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ACTC1P68032 377 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ACTA1P68133 377 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 CCNJQ5T5M9 372 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ASB18Q6ZVZ8 466 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 BMP8AQ7Z5Y6 402 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 TTC9Q92623 222 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 STACQ99469 402 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 APOOQ9BUR5 198 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ADGRL4Q9HBW9 690 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ATP13A2Q9NQ11 1180 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 C14orf105Q9NVL8 296 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 ZMIZ1Q9ULJ6 1067 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 DAPP1Q9UN19 280 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SIGLEC7Q9Y286 467 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 HSPB11Q9Y547 144 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 NPFFR2Q9Y5X5 522 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SNRNP200O75643 2136 aaKnown RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 A0A087WV62 115 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 A0A0A6YYJ9 748 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 A0A1W2PQU0 124 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 LINC01553A4QN01 128 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 URADA6NGE7 173 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 E9PI62 339 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 AKR7A2O43488 359 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 CHP2O43745 196 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 B3GALT2O43825 422 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 REM1O75628 298 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 SOX30O94993 753 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 AK1P00568 194 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 GKN3PP0CG01 181 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 ZNF10P21506 573 aaPredicted RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 SLC2A5P22732 501 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 FCARP24071 287 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 BTCP35070 178 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 NRG3P56975 720 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 RPS7P62081 194 aaKnown RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 SIM1P81133 766 aaPredicted RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 POU4F2Q12837 409 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 COL9A2Q14055 689 aaPredicted RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 ZCCHC12Q6PEW1 402 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 PSRC1Q6PGN9 363 aaPredicted RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 IL20RBQ6UXL0 311 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 THSD4Q6ZMP0 1018 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 GPR135Q8IZ08 494 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 CDRT4Q8N9R6 151 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.44
SRP54-201ENST00000216774 ARMC5Q96C12 935 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 MED28Q9H204 178 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 SLC22A7Q9Y694 548 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 CHD7Q9P2D1 2997 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
SRP54-201ENST00000216774 EEF1E1O43324 174 aaKnown RBP12.32□□□□□ -0.44
SRP54-201ENST00000216774 ZNF3P17036 446 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR10A3P58181 314 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 E2F1Q01094 437 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 NTRK2Q16620 822 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 AMZ1Q400G9 498 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 TRMT12Q53H54 448 aaKnown RBP12.32□□□□□ -0.44
SRP54-201ENST00000216774 FAM27D1Q5T7N8 215 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ZNF776Q68DI1 518 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms