RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 LCN6P62502 163 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 YPEL5P62699 121 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF45Q02386 682 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 KIR2DS3Q14952 304 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 MRPL2Q5T653 305 aaKnown RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 STEAP3Q658P3 488 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SFRP4Q6FHJ7 346 aaPredicted RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ABHD17CQ6PCB6 329 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF613Q6PF04 617 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 NRARPQ7Z6K4 114 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 VWA5B2Q8N398 1253 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SCAIQ8N9R8 606 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 RHOXF1Q8NHV9 184 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ZG16BQ96DA0 208 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 S100A13Q99584 98 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 GABRG3Q99928 467 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SGPP1Q9BX95 441 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 OR52D1Q9H346 318 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 EPHX3Q9H6B9 360 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 IER3IP1Q9Y5U9 82 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 KIR2DS5A0A0G2JLQ3 304 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 A0A0G2JNG1 304 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 A0A0G2JPF8 293 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 A0A1W2PRQ8 180 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 HNRNPCL3B7ZW38 293 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 KIR2DS3K7RE56 304 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 HPGDSO60760 199 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 DNAJB6O75190 326 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SLC2A10O95528 541 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SPARCP09486 303 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 HNRNPCL4P0DMR1 293 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 RNH1P13489 461 aaKnown RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SLC6A6P31641 620 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 DNASE1L1P49184 302 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 KIR2DS5Q14953 304 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ARHGAP19Q14CB8 494 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 HES5Q5TA89 166 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 MEDAGQ5VYS4 303 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 RPTNQ6XPR3 784 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 TMED4Q7Z7H5 227 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ADOQ96SZ5 270 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 GMEB1Q9Y692 573 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 INMT-MINDY4F8WBC2 141 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 WNT3P56703 355 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ERVK-25P63136 954 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 CD300CQ08708 224 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 CCINQ13939 588 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 KIAA0907Q7Z7F0 614 aaPredicted RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 NSMAFQ92636 917 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 NUDT22Q9BRQ3 303 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 ALG8Q9BVK2 526 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 MTHFD2LQ9H903 347 aaPredicted RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 THSD1Q9NS62 852 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 FGF21Q9NSA1 209 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 RNF215Q9Y6U7 377 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 HYKKA2RU49 373 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 RNF13O43567 381 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 AGR2O95994 175 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 MAS1P04201 325 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 CTSBP07858 339 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 TCTN3Q6NUS6 607 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 BEST4Q8NFU0 473 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 TMEM239Q8WW34 195 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 MS4A6EQ96DS6 147 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 MS4A4EQ96PG1 132 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 TMEM246Q9BRR3 403 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 FUZQ9BT04 418 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 GPN2Q9H9Y4 310 aaPredicted RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 TMEM45AQ9NWC5 275 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 KCNE3Q9Y6H6 103 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 UBE2QL1A1L167 161 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 TRAPPC13A5PLN9 417 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 PEX12O00623 359 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 P2RX6O15547 441 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 LRRTM2O43300 516 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 UPK1BO75841 260 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF823P16415 610 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 PSMD4P55036 377 aaKnown RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 EIF2B5Q13144 721 aaKnown RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 CBLBQ13191 982 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 TBCEQ15813 527 aaPredicted RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 LINC00471Q8N535 108 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 FN3KQ9H479 309 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 SLC6A14Q9UN76 642 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 EXOSC1Q9Y3B2 195 aaKnown RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 PRRC2CQ9Y520 2896 aaKnown RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 METTL12A8MUP2 240 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 WISP3O95389 354 aaPredicted RBP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 F13BP05160 661 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 JMJD7P0C870 316 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 LSM11P83369 360 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHPF2-201ENST00000035307 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms