RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 NtsQ9D3P9 169 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ribc2Q9D4Q1 309 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmem114Q9D563 222 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cmtm2aQ9DAR1 169 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pop7Q9DCH2 140 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ccdc22Q9JIG7 627 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Psmg1Q9JK23 289 aa8.42□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zfp979A2A799 407 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc9a5B2RXE2 898 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm9493F6SVV1 192 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rdh19G5E8H9 318 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc22a1O08966 556 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Bet1O35623 118 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cops3O88543 423 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Krt8P11679 490 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 BgnP28653 369 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 C5ar1P30993 351 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Map2k4P47809 397 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cdh5P55284 784 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 DsppP97399 934 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1442Q0VEV7 312 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 H2-DMb2Q31099 261 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Adam5Q3TTE0 751 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 TraddQ3U0V2 310 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm10192Q3V0S1 108 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 1700012B07RikQ3V0S8 276 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sel1l2Q3V172 688 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Elmod1Q3V1U8 326 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Trcg1Q58Y74 825 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sidt1Q6AXF6 827 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmem270Q6UJB9 264 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rab39aQ8BHD0 217 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cyp20a1Q8BKE6 462 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sash3Q8K352 380 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r183Q8K3N5 305 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmed4Q8R1V4 227 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Aspscr1Q8VBT9 550 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr437Q8VEV1 310 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr770Q8VGC2 311 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Clcc1Q99LI2 539 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 GsdmcQ99NB5 468 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mcrip2Q9CQB2 160 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Dmrtc1c1Q9D410 238 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hyal6Q9D4E9 494 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 EefsecQ9JHW4 583 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hsd17b6Q9R092 317 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pex11aQ9Z211 246 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mbd1Q9Z2E2 636 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 DnpepQ9Z2W0 473 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Keap1Q9Z2X8 624 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm35060A0A140LIV7 231 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Glb1l3A2RSQ1 649 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Xkr6E9Q6C8 638 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pagr1bF6V0H0 108 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm21976J3QNN2 249 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn2r57L7N269 863 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pknox1O70477 436 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fli1P26323 452 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Aldh3a1P47739 453 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 NcanP55066 1268 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nutf2P61971 127 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rab3aP63011 220 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rbp1Q00915 135 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Arl14Q3SXC5 192 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sppl2bQ3TD49 578 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rpl35Q6ZWV7 123 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mettl27Q8BGM4 238 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ythdf3Q8BYK6 585 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Xkr8Q8C0T0 401 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Abhd18Q8C1A9 464 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pcgf1Q8R023 259 aaKnown RBP8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r36Q8R2E3 305 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Setd7Q8VHL1 366 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pth2Q91W27 100 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fkbp6Q91XW8 327 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Elovl6Q920L5 267 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Plpp3Q99JY8 312 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mrpl52Q9D0Y8 121 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mrps33Q9D2R8 106 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 GmprQ9DCZ1 345 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cngb3Q9JJZ9 694 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Timm8a1Q9WVA2 97 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pnpla6Q3TRM4 1355 aa8.41□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fam90a1aA2A4E2 429 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm13124A2A752 406 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zfp973A2BE20 318 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Lcn11A2BHR2 178 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sac3d1A6H687 427 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zscan25B2RX31 543 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tatdn2B7ZNL9 783 aaKnown RBP8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rbm24D3Z4I3 236 aaKnown RBP8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kifc5bE9PUA5 672 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm5407E9Q7Q1 248 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm3424L7N298 263 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm8246M0QWX9 263 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Anxa2P07356 339 aaKnown RBP8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 EnpepP16406 945 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 C2P21180 760 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mas1P30554 324 aa8.4□□□□□ -1.06
Upf3b-201ENSMUST00000076265 LtbP41155 306 aa8.4□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms