RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Cadm2Q8BLQ9 435 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Faim2Q8K097 317 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Dync2li1Q8K0T2 351 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Plekho2Q8K124 495 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Olfr935Q8VG16 308 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Olfr658Q8VGV5 323 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 BollQ924M5 281 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 PaicsQ9DCL9 425 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Elovl4Q9EQC4 312 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Fgf20Q9ESL9 211 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Ccnl2Q9JJA7 518 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc22a21Q9WTN6 564 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Wdfy3Q6VNB8 3508 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 TrdcA0A0G2JEU3 153 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Sac3d1A6H687 427 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Xpnpep2B1AVD1 674 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Gm20695H3BLK7 282 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Nfatc1O88942 717 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Cd8aP01731 247 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Prph2P15499 346 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 KapP61110 121 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Hoxd1Q01822 328 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 HbegfQ06186 208 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Elavl3Q60900 367 aaKnown RBP13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Atp11bQ6DFW5 1175 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Tas2r3Q7TQA7 316 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Nceh1Q8BLF1 408 aaKnown RBP13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc9a7Q8BLV3 726 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Wdfy2Q8BUB4 400 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Samd7Q8C8Y5 445 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Q91W34 466 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 ScgnQ91WD9 276 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc35b3Q922Q5 369 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Cers5Q9D6K9 414 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Izumo2Q9DA16 220 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Tinf2Q9QXG9 341 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Pex14Q9R0A0 376 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Trim3Q9R1R2 744 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Clec2iQ9WVF9 217 aa13.58□□□□□ -0.24
Msx3-201ENSMUST00000055353 Vmn1r90A0A087WR36 309 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Mthfd2lD3YZG8 338 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Gm6619F6URP1 175 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Zbtb25G3UW50 439 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Vmn2r109K7N747 858 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Bhlhe40O35185 411 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Stmn3O70166 180 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Syt4P40749 425 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 UbqlnlQ14DL0 610 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Brf2Q3UAW9 420 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 E330014E10RikQ3UL33 481 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 D5Ertd577eQ499F0 481 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Spire1Q52KF3 598 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Nup62Q63850 526 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Polr2mQ6P6I6 366 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Otop2Q80SX5 563 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Trmt12Q8BG71 446 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Fam109aQ8BH49 266 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Fam92aQ8BP22 355 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Vmn1r32Q8R2D9 302 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Irf2bp1Q8R3Y8 584 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc52a3Q9D6X5 460 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Sorcs2Q9EPR5 1159 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Chrm3Q9ERZ3 589 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Ybx2Q9Z2C8 360 aaKnown RBP13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Igf2rQ07113 2483 aaKnown RBP13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Malrd1A2AJX4 2123 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Golga4Q91VW5 2238 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Olfr1076A2AK60 313 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Gm11397F6V5V4 377 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Vmn2r75G5E8Z7 853 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 P03987 398 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 F9P16294 471 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 LipcP27656 510 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Gabrb1P50571 474 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Ddx6P54823 483 aaKnown RBP13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Map3k8Q07174 467 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Q3USZ8 430 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc47a2Q3V050 573 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 EndouQ3V188 412 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Surf4Q64310 269 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Smarcd3Q6P9Z1 483 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Adamtsl2Q7TSK7 957 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Adam29Q811Q4 763 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Fbxl21Q8BFZ4 434 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc35f1Q8BGK5 408 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Kctd7Q8BJK1 289 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 NdnfQ8C119 568 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Ssuh2Q8C3L1 340 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Gramd1cQ8CI52 457 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 TifabQ8JZM6 147 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Slc31a1Q8K211 196 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Serpinb9gQ8VHQ1 377 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Cstf1Q99LC2 431 aaKnown RBP13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Atp5f1Q9CQQ7 256 aaKnown RBP13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Ints12Q9D168 461 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Rnf32Q9JIT1 368 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Cyp2d22Q9JKY7 500 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Dctn6Q9WUB4 190 aa13.57□□□□□ -0.24
Msx3-201ENSMUST00000055353 Heatr5bQ8C547 2070 aa13.56□□□□□ -0.24
Msx3-201ENSMUST00000055353 Olfr1366A0A1W2P740 328 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms