RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 ZNF559Q9BR84 538 aa7.86□□□□□ -1.15
HNRNPU-222ENST00000639880 SGPP1Q9BX95 441 aa7.86□□□□□ -1.15
HNRNPU-222ENST00000639880 SLIRPQ9GZT3 109 aaKnown RBP7.86□□□□□ -1.15
HNRNPU-222ENST00000639880 UPB1Q9UBR1 384 aa7.86□□□□□ -1.15
HNRNPU-222ENST00000639880 NTNG1Q9Y2I2 539 aa7.86□□□□□ -1.15
HNRNPU-222ENST00000639880 CCL27Q9Y4X3 112 aa7.86□□□□□ -1.15
HNRNPU-222ENST00000639880 CABIN1Q9Y6J0 2220 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PRSS38A1L453 326 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 FCMRO60667 390 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PPM1BO75688 479 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 GP1BBP13224 206 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 CPMP14384 443 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 CFL1P23528 166 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 MAPK3P27361 379 aaPredicted RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SHC1P29353 583 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ACTA2P62736 377 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ACTG2P63267 376 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 REEP5Q00765 189 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ZNF77Q15935 545 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 C3orf38Q5JPI3 329 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 LRFN4Q6PJG9 635 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TTLL10Q6ZVT0 673 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 USP53Q70EK8 1073 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 MEPCEQ7L2J0 689 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SLC29A4Q7RTT9 530 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TMPRSS9Q7Z410 1059 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SPPL3Q8TCT6 385 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SNAPC3Q92966 411 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ELP4Q96EB1 424 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 MSANTD3Q96H12 275 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 HYLS1Q96M11 299 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ALOXE3Q9BYJ1 711 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TMEM168Q9H0V1 697 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 APOBEC3BQ9UH17 382 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ADAM29Q9UKF5 820 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 FAM186AA6NE01 2351 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 AHSA1O95433 338 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 AK1P00568 194 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 GTF2F2P13984 249 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 MYOGP15173 224 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 GIFP27352 417 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 HOXA9P31269 272 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 MRPL19P49406 292 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 GDI2P50395 445 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 LIM2P55344 173 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ERVK-25P63136 954 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 CKAP5Q14008 2032 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SF3A2Q15428 464 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PYHIN1Q6K0P9 492 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TMEM150AQ86TG1 271 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 NANOGP1Q8N7R0 232 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 OR52R1Q8NGF1 315 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 OR2L8Q8NGY9 312 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TM9SF4Q92544 642 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SLC35B4Q969S0 331 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PITHD1Q9GZP4 211 aaPredicted RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 COQ3Q9NZJ6 369 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 MGAT4CQ9UBM8 478 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 OSGIN1Q9UJX0 560 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PCDHGB2Q9Y5G2 931 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PIAS3Q9Y6X2 628 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PIKFYVEQ9Y2I7 2098 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 A0A1W2PR48 441 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 C5orf51A6NDU8 294 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 M0R082 166 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TRIM3O75382 744 aaPredicted RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 HNRNPA2B1P22626 353 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PRPH2P23942 346 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 FNTBP49356 437 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 Q6ZSR6 202 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 LACC1Q8IV20 430 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 OR9A4Q8NGU2 314 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SAMD11Q96NU1 681 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PITX2Q99697 317 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 CDCA4Q9BXL8 241 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 RANBP3Q9H6Z4 567 aaPredicted RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SYNPO2LQ9H987 977 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 TRPV4Q9HBA0 871 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SEMA4GQ9NTN9 838 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 SIDT1Q9NXL6 827 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 PRODH2Q9UF12 536 aa7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 ATXN7L1Q9ULK2 861 aaPredicted RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 NOP16Q9Y3C1 178 aaKnown RBP7.85□□□□□ -1.15
HNRNPU-222ENST00000639880 CCDC88CQ9P219 2028 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 CPED1A4D0V7 1026 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 KRT33AO76009 404 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 NRG3P56975 720 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 SNRPGP62308 76 aaKnown RBP7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 RAE1P78406 368 aaKnown RBP7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 POU4F2Q12837 409 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 ARFRP1Q13795 201 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 PDE7AQ13946 482 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 ZMAT1Q5H9K5 638 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 PRAMEF17Q5VTA0 474 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 SAXO2Q658L1 398 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 C12orf40Q86WS4 652 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 CCDC28AQ8IWP9 274 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 PRR22Q8IZ63 422 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 SFXN5Q8TD22 340 aa7.84□□□□□ -1.15
HNRNPU-222ENST00000639880 TXNDC15Q96J42 360 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms