RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 APOBEC3BQ9UH17 382 aaKnown RBP17.39■□□□□ 0.37
SCARB2-213ENST00000638680 DRGXA6NNA5 263 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 SULT1C2O00338 296 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 NUDT7P0C024 238 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ELOAQ14241 798 aaKnown RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 PGGHGQ32M88 737 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 DCST2Q5T1A1 773 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 TMPPEQ6ZT21 453 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 LAX1Q8IWV1 398 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 OR13F1Q8NGS4 319 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 OR2M2Q96R28 347 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF587Q96SQ5 575 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 OLAHQ9NV23 265 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 POU2F3Q9UKI9 436 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ARHGAP33O14559 1287 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 HOXB9P17482 250 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF91Q05481 1191 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 MAVSQ7Z434 540 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 DNAJC22Q8N4W6 341 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 OR1J4Q8NGS1 313 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ZBTB8AQ96BR9 441 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 SLC17A9Q9BYT1 436 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 FANCFQ9NPI8 374 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 DUX1O43812 170 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 SSX4O60224 188 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 CACNG3O60359 315 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 SERPINA5P05154 406 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 PNMTP11086 282 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 IDH3GP51553 393 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 INAVAQ3KP66 663 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 OR5H6Q8NGV6 325 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ADAMTS14Q8WXS8 1223 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 VRK1Q99986 396 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 SEC14L5O43304 696 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 EGFP01133 1207 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 RPS5P46782 204 aaKnown RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 APOOLQ6UXV4 268 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 C12orf45Q8N5I9 185 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ACOT11Q8WXI4 607 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ALOXE3Q9BYJ1 711 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 GASTP01350 101 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 CRABP1P29762 137 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 POLR2IP36954 125 aaKnown RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 IL13RA1P78552 427 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 TLE3Q04726 772 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 STEAP3Q658P3 488 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF585AQ6P3V2 769 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 LYPD4Q6UWN0 246 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 PDZD3Q86UT5 571 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 HORMAD2Q8N7B1 307 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 OR5L2Q8NGL0 311 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 CPPED1Q9BRF8 314 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-213ENST00000638680 EGLN3Q9H6Z9 239 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 RCE1Q9Y256 329 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 RHBDD3Q9Y3P4 386 aa17.38■□□□□ 0.37
SCARB2-213ENST00000638680 TGM5O43548 720 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 C5AR1P21730 350 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 HLA-DMAP28067 261 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 BTN1A1Q13410 526 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF534Q76KX8 674 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 ACOT4Q8N9L9 421 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 DIO2Q92813 273 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 MALSU1Q96EH3 234 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 PRRT1Q99946 306 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 PIGBOS1A0A0B4J2F0 54 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 TRBV4-1A0A0J9YWV2 114 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 PRICKLE3O43900 615 aaPredicted RBP17.37■□□□□ 0.37
SCARB2-213ENST00000638680 HNRNPA1P09651 372 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCARB2-213ENST00000638680 BEX5Q5H9J7 111 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 CD163Q86VB7 1156 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF679Q8IYX0 411 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 STEAP2Q8NFT2 490 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 TMPRSS11EQ9UL52 423 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 COPS3Q9UNS2 423 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 ADRA1AP35348 466 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 HHEXQ03014 270 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 NHSL2Q5HYW2 709 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 AGAP7PQ5VUJ5 663 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 LCN10Q6JVE6 187 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 B3GNT9Q6UX72 402 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 SHDQ96IW2 340 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 KCNJ16Q9NPI9 418 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 ANKRD33BA6NCL7 494 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 POLR1CO15160 346 aaPredicted RBP17.37■□□□□ 0.37
SCARB2-213ENST00000638680 CHATP28329 748 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 VIPR2P41587 438 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 DLX5P56178 289 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 UBE2NLQ5JXB2 153 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF100Q8IYN0 542 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 NLGN4XQ8N0W4 816 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 OR2T11Q8NH01 316 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 SMIM3Q9BZL3 60 aa17.37■□□□□ 0.37
SCARB2-213ENST00000638680 RPS2P15880 293 aaKnown RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ZNF43P17038 809 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 EIF2DP41214 584 aaKnown RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 ARL6IP1Q15041 203 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 SYPL1Q16563 259 aa17.36■□□□□ 0.37
SCARB2-213ENST00000638680 MRPL10Q7Z7H8 261 aaKnown RBP17.36■□□□□ 0.37
SCARB2-213ENST00000638680 PRR22Q8IZ63 422 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms