RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 UFM1P61960 85 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 FAM27E3Q08E93 113 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 GLYR1Q49A26 553 aaPredicted RBP15.92■□□□□ 0.14
PNKP-230ENST00000638016 KLHL26Q53HC5 615 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 HMGN2P46Q86SG4 172 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 GTPBP8Q8N3Z3 284 aaPredicted RBP15.92■□□□□ 0.14
PNKP-230ENST00000638016 NATD1Q8N6N6 113 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 OR8J2Q8NGG1 315 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 GOT1L1Q8NHS2 421 aaPredicted RBP15.92■□□□□ 0.14
PNKP-230ENST00000638016 ADGRG7Q96K78 797 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 SLC35G5Q96KT7 338 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 SDF2Q99470 211 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 OR51I1Q9H343 314 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 RNF122Q9H9V4 155 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 TMBIM4Q9HC24 238 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 SLC24A3Q9HC58 644 aa15.92■□□□□ 0.14
PNKP-230ENST00000638016 A0A0J9YW62 118 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 TNFSF11O14788 317 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 EFNA2O43921 213 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 CXCL13O43927 109 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 FCMRO60667 390 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 SNNO75324 88 aaPredicted RBP15.91■□□□□ 0.14
PNKP-230ENST00000638016 TUBBP07437 444 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 LINGO3P0C6S8 592 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 ZNF17P17021 662 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 EPHA3P29320 983 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 LCN1P31025 176 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 CCKARP32238 428 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 ATP12AP54707 1039 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 SORDQ00796 357 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 GPR68Q15743 365 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 SGCBQ16585 318 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 FAM174BQ3ZCQ3 159 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 PDZK1Q5T2W1 519 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 TNFAIP8L2Q6P589 184 aaPredicted RBP15.91■□□□□ 0.14
PNKP-230ENST00000638016 ZNF474Q6S9Z5 364 aaPredicted RBP15.91■□□□□ 0.14
PNKP-230ENST00000638016 MAVSQ7Z434 540 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 CDC20BQ86Y33 519 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 OR10D3Q8NH80 312 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 RFWD2Q8NHY2 731 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 RAB8BQ92930 207 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 MOAP1Q96BY2 351 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 TLCD1Q96CP7 247 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 MARK4Q96L34 752 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 ACBD3Q9H3P7 528 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 PIGMQ9H3S5 423 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 AIG1Q9NVV5 245 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 ICAM5Q9UMF0 924 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 PRR14LQ5THK1 2151 aa15.91■□□□□ 0.14
PNKP-230ENST00000638016 A0A087WZY1 265 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 A0A1W2PPR1 153 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 LINC01387J3KSC0 135 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 BCAS1O75363 584 aaPredicted RBP15.9■□□□□ 0.14
PNKP-230ENST00000638016 KRT16P08779 473 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 OR12D1P0DN82 309 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 EPXP11678 715 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 IST1P53990 364 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 EEFSECP57772 596 aaKnown RBP15.9■□□□□ 0.14
PNKP-230ENST00000638016 FUT5Q11128 374 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 CASP8Q14790 479 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 GUSBP1Q15486 140 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 CROCCP2Q86T23 111 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 KIF18BQ86Y91 864 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 MISPQ8IVT2 679 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 WDR75Q8IWA0 830 aaKnown RBP15.9■□□□□ 0.14
PNKP-230ENST00000638016 ACTRT2Q8TDY3 377 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 ZBTB8AQ96BR9 441 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 TESCQ96BS2 214 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 INPP5KQ9BT40 448 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 MKLN1Q9UL63 735 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 PLEKHA6Q9Y2H5 1048 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 ZNF175Q9Y473 711 aa15.9■□□□□ 0.14
PNKP-230ENST00000638016 PRAMEF27A3QJZ7 478 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 C7orf72A4D263 438 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 SH3D21A4FU49 640 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 E9PBE3 544 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 NUDT14O95848 222 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 CGAP01215 116 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 SFTPDP35247 375 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 PEX19P40855 299 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 CDKN2CP42773 168 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 RPS3AP61247 264 aaKnown RBP15.89■□□□□ 0.13
PNKP-230ENST00000638016 DAZAP2Q15038 168 aaPredicted RBP15.89■□□□□ 0.13
PNKP-230ENST00000638016 OR2A2Q6IF42 318 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 OGFOD2Q6N063 350 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 CHDHQ8NE62 594 aaPredicted RBP15.89■□□□□ 0.13
PNKP-230ENST00000638016 FBXO27Q8NI29 283 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 ARL8AQ96BM9 186 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 SRXN1Q9BYN0 137 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 CCM2LQ9NUG4 571 aaPredicted RBP15.89■□□□□ 0.13
PNKP-230ENST00000638016 THAP1Q9NVV9 213 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 DTNAQ9Y4J8 743 aa15.89■□□□□ 0.13
PNKP-230ENST00000638016 PRSS51A0A1B0GVH4 220 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 MSTNO14793 375 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 SNUPNO95149 360 aaKnown RBP15.88■□□□□ 0.13
PNKP-230ENST00000638016 P2RX1P51575 399 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 CCR4P51679 360 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 ART1P52961 327 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 RAC1P63000 192 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 OCRLQ01968 901 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms