RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF311Q5JNZ3 666 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 ZNF324BQ6AW86 544 aaPredicted RBP14.57□□□□□ -0.08
CLN6-216ENST00000636876 SIAH3Q8IW03 269 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 ARHGAP24Q8N264 748 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 FAM71CQ8NEG0 241 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 B4GALNT2Q8NHY0 566 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 SH3YL1Q96HL8 342 aaPredicted RBP14.57□□□□□ -0.08
CLN6-216ENST00000636876 UBQLN3Q9H347 655 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 QPCTLQ9NXS2 382 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 MED11Q9P086 117 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 FBXL2Q9UKC9 423 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 PRPF19Q9UMS4 504 aaKnown RBP14.57□□□□□ -0.08
CLN6-216ENST00000636876 CARD8Q9Y2G2 431 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 RP1L1Q8IWN7 2480 aaPredicted RBP14.57□□□□□ -0.08
CLN6-216ENST00000636876 SVILO95425 2214 aa14.57□□□□□ -0.08
CLN6-216ENST00000636876 M0QX08 132 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 EBAG9O00559 213 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 GSTA4O15217 222 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 GYG2O15488 501 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 ZNF264O43296 627 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 SUV39H1O43463 412 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 HCRTR2O43614 444 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 BCAS1O75363 584 aaPredicted RBP14.56□□□□□ -0.08
CLN6-216ENST00000636876 MFN2O95140 757 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 MSX1P28360 303 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 PGM1P36871 562 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 MAGEA5P43359 124 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 EEF1A1P68104 462 aaKnown RBP14.56□□□□□ -0.08
CLN6-216ENST00000636876 PLAURQ03405 335 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 SKP2Q13309 424 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 CEACAM7Q14002 265 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 ZSWIM7Q19AV6 140 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 DNAL1Q4LDG9 190 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 MRPL2Q5T653 305 aaKnown RBP14.56□□□□□ -0.08
CLN6-216ENST00000636876 RNF220Q5VTB9 566 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 DHRS4L2Q6PKH6 230 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 ZNF836Q6ZNA1 936 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 ARMC8Q8IUR7 673 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 FAM109AQ8N4B1 249 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 TNIP2Q8NFZ5 429 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 FAR1Q8WVX9 515 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 NR4A3Q92570 626 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 CNOT9Q92600 299 aaKnown RBP14.56□□□□□ -0.08
CLN6-216ENST00000636876 DTNBP1Q96EV8 351 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 BARD1Q99728 777 aaKnown RBP14.56□□□□□ -0.08
CLN6-216ENST00000636876 BTBD10Q9BSF8 475 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 RSPO3Q9BXY4 272 aaPredicted RBP14.56□□□□□ -0.08
CLN6-216ENST00000636876 LAT2Q9GZY6 243 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 ZDHHC11Q9H8X9 412 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 ASF1BQ9NVP2 202 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 SEC14L3Q9UDX4 400 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 PCNX3Q9H6A9 2034 aa14.56□□□□□ -0.08
CLN6-216ENST00000636876 NCKAP5O14513 1909 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CDHR4A6H8M9 788 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CXCR6O00574 342 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CYP7B1O75881 506 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 UBTFL6P0CB48 400 aaPredicted RBP14.55□□□□□ -0.08
CLN6-216ENST00000636876 MST1P26927 711 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 PRKAR1BP31321 381 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 KDELR2P33947 212 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 RASSF2P50749 326 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 P2RX1P51575 399 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CRYBA2P53672 197 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 MLLT10P55197 1068 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 SUMO3P55854 103 aaPredicted RBP14.55□□□□□ -0.08
CLN6-216ENST00000636876 GABPB1Q06547 395 aaPredicted RBP14.55□□□□□ -0.08
CLN6-216ENST00000636876 DMTNQ08495 405 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CMPK2Q5EBM0 449 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CBLN3Q6UW01 205 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CCDC121Q6ZUS5 278 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 GRAMD2AQ8IUY3 354 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CLIP4Q8N3C7 705 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 TMCO5AQ8N6Q1 288 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 FAM156AQ8NDB6 213 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 TOR1AIP2Q8NFQ8 470 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 FIG4Q92562 907 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 TAMM41Q96BW9 452 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 KLHDC3Q9BQ90 382 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 PINK1Q9BXM7 581 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 TSPAN10Q9H1Z9 355 aaPredicted RBP14.55□□□□□ -0.08
CLN6-216ENST00000636876 ARMC7Q9H6L4 198 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 PTGES2Q9H7Z7 377 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 EXOSC3Q9NQT5 275 aaKnown RBP14.55□□□□□ -0.08
CLN6-216ENST00000636876 AGPAT4Q9NRZ5 378 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 OLAHQ9NV23 265 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 RLIMQ9NVW2 624 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 DNAJB12Q9NXW2 375 aaKnown RBP14.55□□□□□ -0.08
CLN6-216ENST00000636876 ICAM5Q9UMF0 924 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 CHST2Q9Y4C5 530 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 NBASA2RRP1 2371 aa14.55□□□□□ -0.08
CLN6-216ENST00000636876 HEATR5AQ86XA9 2040 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 FREM3P0C091 2139 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 ZNF407Q9C0G0 2248 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 ANKUB1A6NFN9 424 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 B8ZZF3 427 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 NPIPA5E9PKD4 350 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 GMFGO60234 142 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 TPST1O60507 370 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 IFNA14P01570 189 aa14.54□□□□□ -0.08
CLN6-216ENST00000636876 OPN1SWP03999 348 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms