RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 AGAP7PQ5VUJ5 663 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 AGAP6Q5VW22 663 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 OR52B6Q8NGF0 335 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 HYLS1Q96M11 299 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 AGAP4Q96P64 663 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 RAB6CQ9H0N0 254 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 CDK2P24941 298 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 GSK3AP49840 483 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 ENDOVQ8N8Q3 282 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 DEFB108BQ8NET1 73 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 ASB9Q96DX5 294 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 FAM173AQ9BQD7 235 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 SEMA4CQ9C0C4 833 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 DHCR7Q9UBM7 475 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 A0A0J9YY10 115 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 SH2D7A6NKC9 451 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 CYB5BO43169 146 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 FPR1P21462 350 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 HLA-DMAP28067 261 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 EMX2Q04743 252 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC16A14Q7RTX9 510 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 IRF2BP1Q8IU81 584 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 CCDC71LQ8N9Z2 235 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 SAMD10Q9BYL1 202 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 ZDHHC7Q9NXF8 308 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 MTCH1Q9NZJ7 389 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 CRYBA1P05813 215 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 KCTD20Q7Z5Y7 419 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 OR8J2Q8NGG1 315 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 SYNPRQ8TBG9 265 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 CASD1Q96PB1 797 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 CDCP1Q9H5V8 836 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 MAB21L2Q9Y586 359 aa16.79■□□□□ 0.28
CACNA1A-227ENST00000636549 INMT-MINDY4F8WBC2 141 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 KITLGP21583 273 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 MC2RQ01718 297 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 BAXQ07812 192 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 DNAJB8Q8NHS0 232 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 GOT1L1Q8NHS2 421 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 KIAA0513O60268 411 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 DRD1P21728 446 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 DAP3P51398 398 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 ILKQ13418 452 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 ARHGAP11AQ6P4F7 1023 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 ZADH2Q8N4Q0 377 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 OR4N2Q8NGD1 307 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 UFSP2Q9NUQ7 469 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 CLEC5AQ9NY25 188 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 FAAHO00519 579 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 RNASE10Q5GAN6 216 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 PLEKHO2Q8TD55 490 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 PAQR8Q8TEZ7 354 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 TRIB1Q96RU8 372 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 ARHGEF15O94989 841 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 AFF3P51826 1226 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 FUT2Q10981 343 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 SPARTQ8N0X7 666 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 ACTRT3Q9BYD9 372 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 GNG12Q9UBI6 72 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 A8MXE2 369 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 FCGR2AP12318 317 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 POU3F1Q03052 451 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 WDSUB1Q8N9V3 476 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 FGF13Q92913 245 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 PCDHGB6Q9Y5F9 930 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 A0A1W2PP18 115 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 FZD9O00144 591 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 GPR32O75388 356 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 KDELR2P33947 212 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 GABRA4P48169 554 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC14A1Q13336 389 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC9A3R2Q15599 337 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 STEAP2Q8NFT2 490 aa16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 PPIL3Q9H2H8 161 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-227ENST00000636549 SEC14L2O76054 403 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 TACR3P29371 465 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 GPX6P59796 221 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 TCTE1Q5JU00 501 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 ZNF529Q6P280 563 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 TSSK4Q6SA08 328 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 OR5L1Q8NGL2 311 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 MUS81Q96NY9 551 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 NGBQ9NPG2 151 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 B3GNT3Q9Y2A9 372 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 FUT1P19526 365 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 FRMD1Q8N878 549 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 TBC1D20Q96BZ9 403 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 TAAR2Q9P1P5 351 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 GHRLQ9UBU3 117 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 OR2J3O76001 311 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 HNRNPA1P09651 372 aaKnown RBP eCLIP16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 MYF5P13349 255 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 ACPPP15309 386 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 SPINT3P49223 89 aa16.77■□□□□ 0.28
CACNA1A-227ENST00000636549 RBMS3Q6XE24 437 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms