RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	C1orf196	B1AJZ1	125 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	CHURC1-FNTB	B4DL54	471 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	C5orf58	C9J3I9	102 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MANBA	O00462	879 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ULK1	O75385	1050 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MOSPD3	O75425	235 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	SIX6	O95475	246 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	HOXC4	P09017	264 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PRPH2	P23942	346 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	TRHR	P34981	398 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ETV5	P41161	510 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ACTR1B	P42025	376 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MMP15	P51511	669 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	XK	P51811	444 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	SRSF11	Q05519	484 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ACSM1	Q08AH1	577 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	UAP1L1	Q3KQV9	507 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	KLHL26	Q53HC5	615 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PAQR6	Q6TCH4	344 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	LRRN1	Q6UXK5	716 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	RBMS3	Q6XE24	437 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	C11orf96	Q7Z7L8	435 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	SERPINA12	Q8IW75	414 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	TRAM1L1	Q8N609	369 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	AQP11	Q8NBQ7	271 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	OR9Q2	Q8NGE9	314 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	OR10K1	Q8NGX5	313 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	RNASE11	Q8TAA1	199 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NEIL3	Q8TAT5	605 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PHOSPHO1	Q8TCT1	267 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	TCTEX1D2	Q8WW35	142 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	BAD	Q92934	168 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	RGMA	Q96B86	450 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC6A18	Q96N87	628 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	IL4I1	Q96RQ9	567 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PFDN5	Q99471	154 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NTMT1	Q9BV86	223 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	C20orf85	Q9H1P6	137 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	CHST8	Q9H2A9	424 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	GPN1	Q9HCN4	374 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ACER3	Q9NUN7	267 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	IL36A	Q9UHA7	158 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	YARS2	Q9Y2Z4	477 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MRPS23	Q9Y3D9	190 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306		A0A1W2PRB8	838 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	SMIM30	A4D0T7	59 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MAGEB17	A8MXT2	336 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NPIPB8	E9PQR5	432 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	GPR39	O43194	453 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	STK16	O75716	305 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	RECK	O95980	971 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ADH5	P11766	374 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ATP1B2	P14415	290 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MST1	P26927	711 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	CHI3L1	P36222	383 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	KIR3DL1	P43629	444 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	XCR1	P46094	333 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	DGKG	P49619	791 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NUBP1	P53384	320 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	CTSC	P53634	463 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PSMA6	P60900	246 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ERV3-1	Q14264	604 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	HABP2	Q14520	560 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MINDY4	Q4G0A6	757 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ATP13A5	Q4VNC0	1218 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	TMIGD1	Q6UXZ0	262 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	UNC5D	Q6UXZ4	953 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	DPPA4	Q7L190	304 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	LHFPL3	Q86UP9	236 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ADIPOR2	Q86V24	386 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	TPRA1	Q86W33	373 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NRSN1	Q8IZ57	195 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	RGL4	Q8IZJ4	473 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	CLDN19	Q8N6F1	224 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	C11orf65	Q8NCR3	313 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	BEST4	Q8NFU0	473 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	OR2A12	Q8NGT7	310 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	LKAAEAR1	Q8TD35	194 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	RXFP4	Q8TDU9	374 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	GTPBP3	Q969Y2	492 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PNPLA2	Q96AD5	504 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ARHGAP9	Q9BRR9	750 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	POLDIP3	Q9BY77	421 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	EGLN1	Q9GZT9	426 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	ARL6	Q9H0F7	186 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	WDR26	Q9H7D7	661 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	C1GALT1	Q9NS00	363 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	FAM120C	Q9NX05	1096 aa	Known RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	NLGN3	Q9NZ94	848 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PPP4R1L	Q9P1A2	415 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	STOX2	Q9P2F5	926 aa	Predicted RBP	10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC9A8	Q9Y2E8	581 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PLEKHA6	Q9Y2H5	1048 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	PCDHB11	Q9Y5F2	797 aa		10.06	□□□□□ -0.8
CHD2-223	ENST00000636306	MEX3A	A1L020	520 aa	Known RBP	10.05	□□□□□ -0.8
CHD2-223	ENST00000636306	LINC01553	A4QN01	128 aa		10.05	□□□□□ -0.8
CHD2-223	ENST00000636306	OR6C68	A6NDL8	312 aa		10.05	□□□□□ -0.8
CHD2-223	ENST00000636306	HEPACAM2	A8MVW5	462 aa		10.05	□□□□□ -0.8
CHD2-223	ENST00000636306	GABRP	O00591	440 aa		10.05	□□□□□ -0.8

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