RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NHLRC3Q5JS37 347 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 CST9Q5W186 159 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 ARSKQ6UWY0 536 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 SEZ6L2Q6UXD5 910 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 FAM71CQ8NEG0 241 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 GANCQ8TET4 914 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 PCNPQ8WW12 178 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 MS4A3Q96HJ5 214 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 LCORQ96JN0 433 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 PRAP1Q96NZ9 151 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 CACYBPQ9HB71 228 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 KCMF1Q9P0J7 381 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 THSD7BQ9C0I4 1608 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 FAM86C2PA6NEL3 165 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 NAP1L6A6NFF2 107 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 MTRF1O75570 445 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 ERAL1O75616 437 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 ELNP15502 786 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 BMP7P18075 431 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 POM121L1PQ3SYA9 428 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 C3P1Q6ZMU1 363 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 TTLQ8NG68 377 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 NUS1Q96E22 293 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 SLC46A2Q9BY10 475 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 ZCCHC4Q9H5U6 513 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 CD93Q9NPY3 652 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 IL20RAQ9UHF4 553 aa13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 PPIEQ9UNP9 301 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-220ENST00000635988 A0A1B0GUH1 482 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 A0A1W2PRU2 124 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 ANKRD61A6NGH8 418 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 UNC119BA6NIH7 251 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 KRBOX1C9JBD0 128 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 G3V3Q6 166 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 ARL6IP5O75915 188 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 ECDO95905 644 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TYRP14679 529 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 SYN1P17600 705 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 AP3S2P59780 193 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TCTE1Q5JU00 501 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 RPL13AP3Q6NVV1 102 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 FAM198BQ6UWH4 519 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 PARS2Q7L3T8 475 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 CHMP1BQ7LBR1 199 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 AMER3Q8N944 861 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 ZNF527Q8NB42 609 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TMEM255BQ8WV15 326 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 IRF7Q92985 503 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 C16orf58Q96GQ5 468 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 IFT27Q9BW83 186 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 OR52D1Q9H346 318 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 WDR26Q9H7D7 661 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 KCNE3Q9Y6H6 103 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 FLRT2O43155 660 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 NTN1O95631 604 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 LRG1P02750 347 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 HPXP02790 462 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 WNT1P04628 370 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 ASGR2P07307 311 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 ANKRD34CP0C6C1 535 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TYRP1P17643 537 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TBXA2RP21731 343 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 SELENOPP49908 381 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 MAP2K6P52564 334 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 E2F1Q01094 437 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 RNASE12Q5GAN4 147 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TMEM215Q68D42 235 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 CCDC116Q8IYX3 515 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 SPICQ8N5J4 248 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 OR51Q1Q8NH59 317 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 CYB5D2Q8WUJ1 264 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 BRD7Q9NPI1 651 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 NANSQ9NR45 359 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 SDHAF2Q9NX18 166 aa13.78□□□□□ -0.2
CACNA1A-220ENST00000635988 A0A1W2PRG6 482 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 E9PI62 339 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF749O43361 778 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 TOXO94900 526 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 TFP02787 698 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 EPXP11678 715 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 CSNK2A2P19784 350 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 PSMB1P20618 241 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 GDNFP39905 211 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ACTC1P68032 377 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ACTA1P68133 377 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 ELFN2Q5R3F8 820 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 DMKNQ6E0U4 476 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 C11orf96Q7Z7L8 435 aa13.77□□□□□ -0.21
CACNA1A-220ENST00000635988 LNX2Q8N448 690 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms