RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CLDN6P56747 220 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 STX17P56962 302 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ROR1Q01973 937 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PAX2Q02962 417 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CD47Q08722 323 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HSPA14Q0VDF9 509 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 NME3Q13232 169 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SRSF5Q13243 272 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 KLF5Q13887 457 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CAPRIN1Q14444 709 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 EXOSC7Q15024 291 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF79Q15937 498 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PKN2Q16513 984 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SGCBQ16585 318 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PCK2Q16822 640 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MICAQ29983 383 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF674Q2M3X9 581 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 QRICH1Q2TAL8 776 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 LRIT3Q3SXY7 679 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 FUT11Q495W5 492 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF789Q5FWF6 425 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MS4A13Q5J8X5 152 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 BEND6Q5SZJ8 279 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TEX35Q5T0J7 233 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 KHDRBS2Q5VWX1 349 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MEDAGQ5VYS4 303 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HIST2H2AA3Q6FI13 130 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 IYDQ6PHW0 289 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C11orf88Q6PI97 169 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CD164L2Q6UWJ8 174 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CWC27Q6UX04 472 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C2orf66Q6UXQ4 117 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 B3GLCTQ6Y288 498 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 RAPH1Q70E73 1250 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 PRSS48Q7RTY5 328 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 BNIPLQ7Z465 357 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF589Q86UQ0 364 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C17orf64Q86WR6 236 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SERPINA12Q8IW75 414 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ITPRIPQ8IWB1 547 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 STHQ8IWL8 128 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 UNC45BQ8IWX7 931 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GVQW1Q8N7I0 195 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM105Q8N8V8 129 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 Q8N9G6 341 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MLKLQ8NB16 471 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 OR2L5Q8NG80 312 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 OR4F5Q8NH21 305 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 FLVCR1-AS1Q8TAF5 88 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 RDH11Q8TC12 318 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TFB1MQ8WVM0 346 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM151AQ8WW52 585 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CRYGNQ8WXF5 182 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HIST1H2ACQ93077 130 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TCEAL3Q969E4 200 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GLYATL1Q969I3 302 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C11orf52Q96A22 123 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 BIRC7Q96CA5 298 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MRPL53Q96EL3 112 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C5orf30Q96GV9 206 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 C1orf147Q96MC9 270 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TCEANC2Q96MN5 208 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF560Q96MR9 790 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC43Q96MW1 224 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SPAG8Q99932 426 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 RIOK1Q9BRS2 568 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TEX13BQ9BXU2 312 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 DEFB126Q9BYW3 111 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ELOVL4Q9GZR5 314 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF350Q9GZX5 532 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 DDX47Q9H0S4 455 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 SLITRK2Q9H156 845 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 GANQ9H2C0 597 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 BOLA2Q9H3K6 86 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ASB8Q9H765 288 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 NRN1Q9NPD7 142 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZDHHC4Q9NPG8 344 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 HPS4Q9NQG7 708 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 IMPAD1Q9NX62 359 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 TECRQ9NZ01 308 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 KLRF1Q9NZS2 232 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 CNIH4Q9P003 139 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ADAM22Q9P0K1 906 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 LEF1Q9UJU2 399 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ABCG2Q9UNQ0 655 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 DIMT1Q9UNQ2 313 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF256Q9Y2P7 627 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MTF2Q9Y483 593 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 MTCH2Q9Y6C9 303 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZFP37Q9Y6Q3 630 aaPredicted RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 YLPM1P49750 1951 aaKnown RBP0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 F5P12259 2224 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ZBED9Q6R2W3 1325 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 ADGRA3Q8IWK6 1321 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 APC2O95996 2303 aa0.82□□□□□ -2.28
SMARCB1-209ENST00000635578 EP300Q09472 2414 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 HIVEP3Q5T1R4 2406 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ABCA2Q9BZC7 2435 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 RIF1Q5UIP0 2472 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms