RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SUN2Q9UH99 717 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 DNPEPQ9ULA0 475 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 KIAA1257Q9ULG3 409 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 GRID1Q9ULK0 1009 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 PLA2G4CQ9UP65 541 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 KCNK6Q9Y257 313 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 CA5BQ9Y2D0 317 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 TMED7Q9Y3B3 224 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 CSNK1G3Q9Y6M4 447 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 SHANK1Q9Y566 2161 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 ICE1Q9Y2F5 2266 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 ITPR3Q14573 2671 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 SVEP1Q4LDE5 3571 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 NSD1Q96L73 2696 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZANQ9Y493 2812 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 A0A1B0GVL5 298 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 TSPAN11A1L157 253 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 TRIM49BA6NDI0 452 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 D6RAR5 112 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 E5RGE8 158 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 LMO7DNF2Z398 122 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 M0QYV0 167 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC28A1O00337 649 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 EPHB6O15197 1021 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 RRP8O43159 456 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 HSF2BPO75031 334 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CSO75390 466 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 GAS8O95995 478 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ATP1B1P05026 303 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ADRB3P13945 408 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ETS1P14921 441 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 FERP16591 822 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF18P17022 549 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 UGT1A6P19224 532 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 POLR2EP19388 210 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 HNRNPA2B1P22626 353 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ITGA3P26006 1051 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 RBMS1P29558 406 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SRD5A2P31213 254 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CEACAM8P31997 349 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 RABIFP47224 123 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CSRP3P50461 194 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 DNA2P51530 1060 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 NR0B1P51843 470 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CNN1P51911 297 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 C21orf59P57076 290 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 POU3F1Q03052 451 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZFP36L1Q07352 338 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CCDC173Q0VFZ6 552 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SRSF6Q13247 344 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CDH18Q13634 790 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 LY6DQ14210 128 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 GK2Q14410 553 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SQLEQ14534 574 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 P2RY6Q15077 328 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 EXT1Q16394 746 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF542PQ5EBM4 170 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC25A53Q5H9E4 307 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 WDR38Q5JTN6 314 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF658Q5TYW1 1059 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 LCN1P1Q5VSP4 162 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SEL1L3Q68CR1 1132 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 WBP2NLQ6ICG8 309 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 GUSBP11Q6P575 273 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 C22orf39Q6P5X5 142 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 DLEU7Q6UYE1 221 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 KDM7AQ6ZMT4 941 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 MACC1Q6ZN28 852 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 C9orf139Q6ZV77 190 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC26A9Q7LBE3 791 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ADAMTSL2Q86TH1 951 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ADCK1Q86TW2 530 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 NLRP14Q86W24 1093 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 PARGQ86W56 976 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 HORMAD1Q86X24 394 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 C17orf82Q86X59 251 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 KIRREL3Q8IZU9 778 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 LSMEM2Q8N112 164 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 KDM8Q8N371 416 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 FAM89BQ8N5H3 189 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 RFLNBQ8N5W9 214 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CCNYQ8ND76 341 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 OR4C15Q8NGM1 316 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 UBA3Q8TBC4 463 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 FCAMRQ8WWV6 532 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 HTR3CQ8WXA8 447 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 SHC3Q92529 594 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 HAS2Q92819 552 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 RFT1Q96AA3 541 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ULK4Q96C45 1275 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 TMA16Q96EY4 203 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ATXN7L3BQ96GX2 97 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF396Q96N95 335 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 NPY6RQ99463 290 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 LGMNQ99538 433 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 LRRC61Q9BV99 259 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 TRIM62Q9BVG3 475 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 DDX47Q9H0S4 455 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 THAP2Q9H0W7 228 aa2.16□□□□□ -2.06
SMARCB1-208ENST00000634926 CARD9Q9H257 536 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms