RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZBTB8AQ96BR9 441 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 SH3YL1Q96HL8 342 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 SFXN2Q96NB2 322 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 ANKRD27Q96NW4 1050 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 DMRTA2Q96SC8 542 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 CGREF1Q99674 301 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 CPPED1Q9BRF8 314 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 RUBCNLQ9H714 662 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 CARD8Q9Y2G2 431 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 DNAJC13O75165 2243 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 FREM3P0C091 2139 aa13.37□□□□□ -0.27
CDC42BPB-209ENST00000634889 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 HNRNPCL3B7ZW38 293 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 FAM47E-STBD1D6RA91 191 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 GMFGO60234 142 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 CSTAP01040 98 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 DBIP07108 87 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 HNRNPCL4P0DMR1 293 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 B3GALT5-AS1P59052 145 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 SKP2Q13309 424 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 CYLC2Q14093 348 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 MAPK11Q15759 364 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 MAPK14Q16539 360 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 BCL2A1Q16548 175 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 TMEM44Q2T9K0 475 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 PLPPR5Q32ZL2 321 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 MMEL1Q495T6 779 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 RUNDC3AQ59EK9 446 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 GCNT6Q5T4J0 391 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 TMEM211Q6ICI0 200 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 CBLN3Q6UW01 205 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 ARSKQ6UWY0 536 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 RPTNQ6XPR3 784 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 SNX32Q86XE0 403 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 ULK2Q8IYT8 1036 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 FAM71CQ8NEG0 241 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 RP9Q8TA86 221 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 TMEM19Q96HH6 336 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 TREX2Q9BQ50 279 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 MED17Q9NVC6 651 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 ARMCX1Q9P291 453 aa13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 RPH3AQ9Y2J0 694 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-209ENST00000634889 MRASO14807 208 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 DNAJA2O60884 412 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 NID1P14543 1247 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 ZNF708P17019 499 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 PGM1P36871 562 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 EIF1P41567 113 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 LHX2P50458 406 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 KCNJ10P78508 379 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 CBFBQ13951 182 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 DCST1Q5T197 706 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 REP15Q6BDI9 236 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 B3GNT6Q6ZMB0 384 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 C3P1Q6ZMU1 363 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 MTDHQ86UE4 582 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 GTPBP8Q8N3Z3 284 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 OR5W2Q8NH69 310 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 ZG16BQ96DA0 208 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 ARSGQ96EG1 525 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 WDYHV1Q96HA8 205 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 CCDC106Q9BWC9 280 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 LAT2Q9GZY6 243 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 QRSL1Q9H0R6 528 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 IKZF5Q9H5V7 419 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 BCL2L10Q9HD36 194 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 EXOSC3Q9NQT5 275 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 STOML1Q9UBI4 398 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 VDAC3Q9Y277 283 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 FAM215AQ9Y5M1 114 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 COL12A1Q99715 3063 aa13.35□□□□□ -0.27
CDC42BPB-209ENST00000634889 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 OR2M5A3KFT3 312 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 C5orf58C9J3I9 102 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 OIP5O43482 229 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 ZG16O60844 167 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 KRT34O76011 436 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 NUDT14O95848 222 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 THBS1P07996 1170 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 NUDT7P0C024 238 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 ARAFP10398 606 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 PEPDP12955 493 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 IL7RP16871 459 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 AGAP20933 346 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 ELK4P28324 431 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 ADH6P28332 368 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 RNF144AP50876 292 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 SMSP52788 366 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 NDUFAF6Q330K2 333 aa13.34□□□□□ -0.27
CDC42BPB-209ENST00000634889 LIN52Q52LA3 116 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms