RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 OIP5O43482 229 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 EIF4E2O60573 245 aaKnown RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 HNRNPCL1O60812 293 aaKnown RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 DCTN3O75935 186 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 ACTL6AO96019 429 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 CSTAP01040 98 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 HNRNPCL4P0DMR1 293 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 HK1P19367 917 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 P2RX1P51575 399 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 GFRA1P56159 465 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 NDUFAF6Q330K2 333 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 GLYR1Q49A26 553 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 C4orf17Q53FE4 359 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 RPS26P11Q5JNZ5 115 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 GKAP1Q5VSY0 366 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 VASNQ6EMK4 673 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 NANOGP8Q6NSW7 305 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 EIF3MQ7L2H7 374 aaKnown RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 HMGN2P46Q86SG4 172 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 DOLPP1Q86YN1 238 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 PEX5LQ8IYB4 626 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 FAM71CQ8NEG0 241 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 OR8J3Q8NGG0 315 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 RELTQ969Z4 430 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 CMTM5Q96DZ9 223 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 SH3GL1Q99961 368 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 KAT8Q9H7Z6 458 aaKnown RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 NANOGQ9H9S0 305 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 SH3BGRL2Q9UJC5 107 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 ACAD8Q9UKU7 415 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 RPH3AQ9Y2J0 694 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-220ENST00000627371 A0A087WZY1 265 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 CLEC18AA5D8T8 446 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 C5orf58C9J3I9 102 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 DBIP07108 87 aaKnown RBP18.4■□□□□ 0.54
PTCD3-220ENST00000627371 BMP7P18075 431 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 TCEA1P23193 301 aaKnown RBP18.4■□□□□ 0.54
PTCD3-220ENST00000627371 PRDX6P30041 224 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 PGM1P36871 562 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 B3GALT5-AS1P59052 145 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 KCNJ10P78508 379 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 CDK6Q00534 326 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 SKP2Q13309 424 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 ADRM1Q16186 407 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 EMC4Q5J8M3 183 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 WLSQ5T9L3 541 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 AAGABQ6PD74 315 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 ARSKQ6UWY0 536 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 CLEC18BQ6UXF7 455 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 SERPINA11Q86U17 422 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 CMIPQ8IY22 773 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 CLEC18CQ8NCF0 446 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 TOR1AIP2Q8NFQ8 470 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 NFKBIDQ8NI38 313 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 BBS10Q8TAM1 723 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 WDR60Q8WVS4 1066 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 ABTB1Q969K4 478 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-220ENST00000627371 SFXN2Q96NB2 322 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 LRRC37BQ96QE4 947 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 UGT2B28Q9BY64 529 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 LAT2Q9GZY6 243 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 PNPLA3Q9NST1 481 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 VDAC3Q9Y277 283 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 SLC5A6Q9Y289 635 aa18.4■□□□□ 0.54
PTCD3-220ENST00000627371 FAM47E-STBD1D6RA91 191 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 LRRTM2O43300 516 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 PGM3O95394 542 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 UBTFL6P0CB48 400 aaPredicted RBP18.39■□□□□ 0.53
PTCD3-220ENST00000627371 NID1P14543 1247 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 IL7RP16871 459 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 CHMP24386 653 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 ZNF41P51814 821 aaPredicted RBP18.39■□□□□ 0.53
PTCD3-220ENST00000627371 SRSF1Q07955 248 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTCD3-220ENST00000627371 SCARB2Q14108 478 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 CYP51A1Q16850 503 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 PLPPR5Q32ZL2 321 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 GXYLT1Q4G148 440 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 DCST1Q5T197 706 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 RAET1LQ5VY80 246 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 REEP3Q6NUK4 255 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 NET1Q7Z628 596 aaPredicted RBP18.39■□□□□ 0.53
PTCD3-220ENST00000627371 FJX1Q86VR8 437 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 TMCO5AQ8N6Q1 288 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 OR5M9Q8NGP3 310 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 OR52P1PQ8NH57 321 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 ARSGQ96EG1 525 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 TIMP4Q99727 224 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 KLHDC3Q9BQ90 382 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 PIGQQ9BRB3 760 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 TP63Q9H3D4 680 aaPredicted RBP18.39■□□□□ 0.53
PTCD3-220ENST00000627371 MED17Q9NVC6 651 aa18.39■□□□□ 0.53
PTCD3-220ENST00000627371 ERRFI1Q9UJM3 462 aaPredicted RBP18.39■□□□□ 0.53
PTCD3-220ENST00000627371 USP9XQ93008 2570 aaPredicted RBP18.38■□□□□ 0.53
PTCD3-220ENST00000627371 NCOA6Q14686 2063 aaPredicted RBP18.38■□□□□ 0.53
PTCD3-220ENST00000627371 PCNX1Q96RV3 2341 aa18.38■□□□□ 0.53
PTCD3-220ENST00000627371 C7orf72A4D263 438 aa18.38■□□□□ 0.53
PTCD3-220ENST00000627371 CLDN24A6NM45 220 aa18.38■□□□□ 0.53
PTCD3-220ENST00000627371 FIGNL2A6NMB9 653 aa18.38■□□□□ 0.53
PTCD3-220ENST00000627371 AIM2O14862 343 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms