RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ANKDD1AQ495B1 522 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 HSD17B12Q53GQ0 312 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 GLT8D1Q68CQ7 371 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 XKR5Q6UX68 686 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ZNF675Q8TD23 568 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SPRYD4Q8WW59 207 aaPredicted RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 ACOT11Q8WXI4 607 aaPredicted RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 GATAD2BQ8WXI9 593 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 MAGIXQ9H6Y5 334 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 DCAF13Q9NV06 445 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 FAM118AQ9NWS6 357 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ERVK-18Q9QC07 812 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 DHDHQ9UQ10 334 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 WDR37Q9Y2I8 494 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SESN1Q9Y6P5 492 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 DOCK1Q14185 1865 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 A0A1W2PPW3 197 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 BLACEA4D250 179 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 LRIT2A6NDA9 550 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 C4orf47A7E2U8 309 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 C12orf71A8MTZ7 269 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 M0R129 80 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 F13BP05160 661 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 CHRM4P08173 479 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 DPP4P27487 766 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SOX3P41225 446 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 MAGEA12P43365 314 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 EPHA5P54756 1037 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 GNG2P59768 71 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SIRPAP78324 504 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 FOXC1Q12948 553 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SF3B4Q15427 424 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■■■□ 20.7
GGA3-223ENST00000621870 FAM189A2Q15884 450 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TCTN1Q2MV58 587 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 AKIRIN2Q53H80 203 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SFTPA1Q8IWL2 248 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 OR1J4Q8NGS1 313 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 OR8S1Q8NH09 359 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 NPRL2Q8WTW4 380 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TM4SF18Q96CE8 201 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 LCORQ96JN0 433 aaPredicted RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 CNN2Q99439 309 aaKnown RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 LRRN3Q9H3W5 708 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 KLHL31Q9H511 634 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 PCDHB16Q9NRJ7 776 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 MAGED1Q9Y5V3 778 aaPredicted RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 PAPPAQ13219 1627 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TRAV27A0A087WT01 109 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 LOC105369274A0A096LPK9 316 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 LOC102723532A0A0G2JNH3 316 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 GFYI3L273 518 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TNFSF15O95150 251 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 RASAL1O95294 804 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 IGHEP01854 428 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 APOC1P02654 83 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SLC35E2P0CK97 266 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 T-ENOLP0DO92 83 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 CSNK1A1P48729 337 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ARHGDIBP52566 201 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 PRPS1P60891 318 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 VBP1P61758 197 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 CSNK2A1P68400 391 aaPredicted RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 SQSTM1Q13501 440 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SELPLGQ14242 412 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SLC22A10Q63ZE4 541 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ZNF773Q6PK81 442 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 MED25Q71SY5 747 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 BHLHA9Q7RTU4 235 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TMED4Q7Z7H5 227 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 C1orf210Q8IVY1 113 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 GPALPP1Q8IXQ4 340 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 OR4N4Q8N0Y3 316 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SLC38A5Q8WUX1 472 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 HDAC2Q92769 488 aaKnown RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 FAM71F1Q96KD3 344 aaPredicted RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 LMF2Q9BU23 707 aaKnown RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 TMEM121BQ9BXQ6 578 aaPredicted RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 WASH6PQ9NQA3 447 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 DAPP1Q9UN19 280 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 USP22Q9UPT9 525 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ARGFXA6NJG6 315 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TTLL8A6PVC2 850 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 TARM1B6A8C7 271 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 FTCDNL1E5RQL4 147 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SLC16A7O60669 478 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ARAFP10398 606 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ZNF16P17020 682 aaPredicted RBP8.63□□□□□ -1.03
GGA3-223ENST00000621870 MAGEA8P43361 318 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 ARPC4P59998 168 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 DNASE1L3Q13609 305 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 SLC48A1Q6P1K1 146 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 DGLUCYQ7Z3D6 616 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 GOLM1Q8NBJ4 401 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 CCDC115Q96NT0 180 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 AMDHD1Q96NU7 426 aa8.63□□□□□ -1.03
GGA3-223ENST00000621870 MED28Q9H204 178 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms