RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 B4GALNT2Q8NHY0 566 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 SPATA5L1Q9BVQ7 753 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 A4GALTQ9NPC4 353 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 SCN3BQ9NY72 215 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 COPS7AQ9UBW8 275 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 U3KQA8 63 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 A0A1B0GWA3 101 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 LILRA5A6NI73 299 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 DYRK3O43781 588 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 AHCYL1O43865 530 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 UGT2B11O75310 529 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 OR2J2O76002 312 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 HTR1AP08908 422 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 TFPIP10646 304 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 CDH2P19022 906 aaPredicted RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 SFTPDP35247 375 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 NAA10P41227 235 aaPredicted RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 PLBD1Q6P4A8 553 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 OR51G2Q8NGK0 314 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 EDEM2Q9BV94 578 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 GPR27Q9NS67 375 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 GTF2A1LQ9UNN4 478 aa9.71□□□□□ -0.86
VPS11-208ENST00000621676 YARS2Q9Y2Z4 477 aaKnown RBP9.71□□□□□ -0.86
VPS11-208ENST00000621676 A0A087WXM4 84 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 DBTP11182 482 aaKnown RBP9.7□□□□□ -0.86
VPS11-208ENST00000621676 MAKP20794 623 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 SLC5A2P31639 672 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 CD79BP40259 229 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 GCGRP47871 477 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 ANXA11P50995 505 aaKnown RBP9.7□□□□□ -0.86
VPS11-208ENST00000621676 TRA2BP62995 288 aaKnown RBP9.7□□□□□ -0.86
VPS11-208ENST00000621676 HYAL4Q2M3T9 481 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 OGFOD3Q6PK18 319 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 KIRREL2Q6UWL6 708 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.7□□□□□ -0.86
VPS11-208ENST00000621676 SPARTQ8N0X7 666 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 SDR9C7Q8NEX9 313 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 B3GNT7Q8NFL0 401 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 OR8D4Q8NGM9 314 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 OR6K6Q8NGW6 343 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 MAN2C1Q9NTJ4 1040 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 KLRF1Q9NZS2 232 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 PADI2Q9Y2J8 665 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 A0A0G2JPF8 293 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 A0A1B0GVG6 124 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 AGAP5A6NIR3 686 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 HNRNPCL2B2RXH8 293 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 HNRNPCL3B7ZW38 293 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 SOCS6O14544 535 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 WBP4O75554 376 aaKnown RBP9.7□□□□□ -0.86
VPS11-208ENST00000621676 ATE1O95260 518 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 PPP1R3DO95685 299 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 HNRNPCL4P0DMR1 293 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 S1PR1P21453 382 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 MAGEA2P43356 314 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 FXNQ16595 210 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 ZNF619Q8N2I2 560 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 OR6C4Q8NGE1 309 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 RORBQ92753 470 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
VPS11-208ENST00000621676 CLDN16Q9Y5I7 305 aa9.7□□□□□ -0.86
VPS11-208ENST00000621676 SH3PXD2BA1X283 911 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 J3QRK9 145 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ATP1B1P05026 303 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 KLK3P07288 261 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 MAD2L1BPQ15013 274 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 DECR1Q16698 335 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ZNF791Q3KP31 576 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 OAFQ86UD1 273 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 C9orf40Q8IXQ3 194 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 C12orf43Q96C57 262 aaKnown RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 DUS3LQ96G46 650 aaKnown RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 ZNF578Q96N58 590 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 DUSP23Q9BVJ7 150 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 HCAR1Q9BXC0 346 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 PITHD1Q9GZP4 211 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 TSPAN10Q9H1Z9 355 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 MAGIXQ9H6Y5 334 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 TMEM27Q9HBJ8 222 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 LYRM4Q9HD34 91 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 LANCL2Q9NS86 450 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 CLEC4AQ9UMR7 237 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 SCDO00767 359 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 FRKP42685 505 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 NR1H2P55055 460 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 CDC42P60953 191 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ST3GAL3Q11203 375 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ZNF691Q5VV52 312 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 KIF18BQ86Y91 864 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 CPOQ8IVL8 374 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 SYT14Q8NB59 555 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 TEX47Q8TBZ9 253 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 GATAD2BQ8WXI9 593 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ORAI1Q96D31 301 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 TRNT1Q96Q11 434 aaKnown RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 ZNF347Q96SE7 839 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms