RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TOMM34Q15785 309 aaPredicted RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 LRRC23Q53EV4 343 aaPredicted RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 ZNF311Q5JNZ3 666 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 PRAMEF8Q5VWM4 474 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 PRAMEF7Q5VXH5 474 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 ARSKQ6UWY0 536 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 PEX5LQ8IYB4 626 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 ZNF527Q8NB42 609 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 OR2M3Q8NG83 312 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 OR1J4Q8NGS1 313 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 SPATA9Q9BWV2 254 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 HOXD1Q9GZZ0 328 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 ZNF703Q9H7S9 590 aaPredicted RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 CALML5Q9NZT1 146 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 MYO7BQ6PIF6 2116 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 DIDO1Q9BTC0 2240 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 CXCR6O00574 342 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK3-210ENST00000620675 CSTAP01040 98 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 HSD17B1P14061 328 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 ETS2P15036 469 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 TNFRSF1BP20333 461 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 PPIAP62937 165 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 MS4A2Q01362 244 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 PLGLB1Q02325 96 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 SKP2Q13309 424 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 VEZF1Q14119 521 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 TBCELQ5QJ74 424 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 PLCZ1Q86YW0 608 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 SIAH3Q8IW03 269 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 FADS6Q8N9I5 356 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 FAM71CQ8NEG0 241 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 CCDC124Q96CT7 223 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 PRR14Q9BWN1 585 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 DEFB127Q9H1M4 99 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 NDE1Q9NXR1 346 aa12.41□□□□□ -0.42
NEK3-210ENST00000620675 DNAJB12Q9NXW2 375 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 SUCOQ9UBS9 1254 aaKnown RBP12.41□□□□□ -0.42
NEK3-210ENST00000620675 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 CDHR4A6H8M9 788 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 GTPBP1O00178 669 aaKnown RBP12.4□□□□□ -0.42
NEK3-210ENST00000620675 AP3D1O14617 1153 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 PDE9AO76083 593 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 UBL4AP11441 157 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 ZNF24P17028 368 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 GGT1P19440 569 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 CD247P20963 164 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 KDELR2P33947 212 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 HSF1Q00613 529 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 C17orf67Q0P5P2 114 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 GNA13Q14344 377 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 ERICH5Q6P6B1 374 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 CCDC121Q6ZUS5 278 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 CCDC80Q76M96 950 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 LACC1Q8IV20 430 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 METTL25Q8N6Q8 603 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 OR4D11Q8NGI4 311 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 OR5M1Q8NGP8 315 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 TNFRSF10DQ9UBN6 386 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 SEC14L3Q9UDX4 400 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.42
NEK3-210ENST00000620675 C15orf41Q9Y2V0 281 aa12.4□□□□□ -0.42
NEK3-210ENST00000620675 COL12A1Q99715 3063 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 GSC2O15499 205 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 ZNF264O43296 627 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 HTR1EP28566 365 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 RYKP34925 604 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 CCR4P51679 360 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 GABPB1Q06547 395 aaPredicted RBP12.39□□□□□ -0.43
NEK3-210ENST00000620675 FXNQ16595 210 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 EIPR1Q53HC9 387 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
NEK3-210ENST00000620675 EIF3MQ7L2H7 374 aaKnown RBP12.39□□□□□ -0.43
NEK3-210ENST00000620675 YRDCQ86U90 279 aaKnown RBP12.39□□□□□ -0.43
NEK3-210ENST00000620675 RBM45Q8IUH3 476 aaKnown RBP12.39□□□□□ -0.43
NEK3-210ENST00000620675 ARMC8Q8IUR7 673 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 TMCO5AQ8N6Q1 288 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 FAM86B1Q8N7N1 296 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 VDAC3Q9Y277 283 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 IGLV3-32A0A0A0MS00 114 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 NPIPA5E9PKD4 350 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 ARPC2O15144 300 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 GSTA4O15217 222 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 ZIC3O60481 467 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 GDF1P27539 372 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 ADH7P40394 386 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 CLK3P49761 638 aaKnown RBP12.39□□□□□ -0.43
NEK3-210ENST00000620675 TOMM20Q15388 145 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 LIN52Q52LA3 116 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 GLYATQ6IB77 296 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 CYP2R1Q6VVX0 501 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 VTCN1Q7Z7D3 282 aa12.39□□□□□ -0.43
NEK3-210ENST00000620675 SPPL2CQ8IUH8 684 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms