RNA–Protein interactions for RNA: ENST00000620349.1

U4.1-201, humanhuman

BASIC

Gene U4, Length 87 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U4.1-201ENST00000620349 TLR4O00206 839 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 NME6O75414 186 aaPredicted RBP0.07□□□□□ -2.4
U4.1-201ENST00000620349 ADRA2AP08913 450 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 CHTF8P0CG12 524 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 PTAFRP25105 342 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 STIP1P31948 543 aaKnown RBP0.07□□□□□ -2.4
U4.1-201ENST00000620349 PRKCIP41743 596 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 FRKP42685 505 aaPredicted RBP0.07□□□□□ -2.4
U4.1-201ENST00000620349 GEMP55040 296 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 EWSR1Q01844 656 aaKnown RBP eCLIP0.07□□□□□ -2.4
U4.1-201ENST00000620349 C17orf67Q0P5P2 114 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 C1orf94Q6P1W5 598 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 SMARCD3Q6STE5 483 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 HACD2Q6Y1H2 254 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 STAC2Q6ZMT1 411 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 SPATA19Q7Z5L4 167 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 RANBP3LQ86VV4 465 aaPredicted RBP0.07□□□□□ -2.4
U4.1-201ENST00000620349 P3H4Q92791 437 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 VPS33AQ96AX1 596 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 OR11A1Q9GZK7 315 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 SRD5A3Q9H8P0 318 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 CALHM2Q9HA72 323 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 VPS54Q9P1Q0 977 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 DEC1Q9P2X7 70 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 RIMS3Q9UJD0 308 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 MAB21L2Q9Y586 359 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 TET2Q6N021 2002 aaPredicted RBP0.07□□□□□ -2.4
U4.1-201ENST00000620349 TTC21BQ7Z4L5 1316 aa0.07□□□□□ -2.4
U4.1-201ENST00000620349 PDS5BQ9NTI5 1447 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 ZNF705EA8MWA4 302 aaPredicted RBP0.06□□□□□ -2.4
U4.1-201ENST00000620349 CFLARO15519 480 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 LINC00869P0C866 280 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 ALPPL2P10696 532 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 ADSSP30520 456 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 RPL4P36578 427 aaKnown RBP0.06□□□□□ -2.4
U4.1-201ENST00000620349 SGSHP51688 502 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 CAPZA1P52907 286 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 KRTAP10-4P60372 401 aaPredicted RBP0.06□□□□□ -2.4
U4.1-201ENST00000620349 ST3GAL3Q11203 375 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 WASHC5Q12768 1159 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 NRF1Q16656 503 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 CLPPQ16740 277 aaPredicted RBP0.06□□□□□ -2.4
U4.1-201ENST00000620349 TCP11X2Q5H9J9 407 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 CD164L2Q6UWJ8 174 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 CAMK2N1Q7Z7J9 78 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 SLC22A16Q86VW1 577 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 ZNF664Q8N3J9 261 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 MIR7-3HGQ8N6C7 128 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 NKAPP1Q8N9T2 125 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 GMCL1P1Q8NEA9 526 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 CDKN2AIPNLQ96HQ2 116 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 GPR137Q96N19 417 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 FAM114A2Q9NRY5 505 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 DCAF13Q9NV06 445 aaKnown RBP0.06□□□□□ -2.4
U4.1-201ENST00000620349 ZNF222Q9UK12 451 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 S4R3C0 116 aa0.06□□□□□ -2.4
U4.1-201ENST00000620349 GSTA1P08263 222 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 CXCL5P42830 114 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 KCNJ1P48048 391 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 RND3P61587 244 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 HERV-K104P63124 156 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 IL15RAQ13261 267 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 PPP2R5CQ13362 524 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 SNTB2Q13425 540 aaKnown RBP0.05□□□□□ -2.4
U4.1-201ENST00000620349 GRB7Q14451 532 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 ZNF684Q5T5D7 378 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 LRRC38Q5VT99 294 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 PNCKQ6P2M8 343 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 MFSD6LQ8IWD5 586 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 BPIFB2Q8N4F0 458 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 ZFP90Q8TF47 636 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 NDRG1Q92597 394 aaKnown RBP0.05□□□□□ -2.4
U4.1-201ENST00000620349 EXOSC8Q96B26 276 aaKnown RBP0.05□□□□□ -2.4
U4.1-201ENST00000620349 FERMT1Q9BQL6 677 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 TMEM245Q9H330 911 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 USP16Q9Y5T5 823 aa0.05□□□□□ -2.4
U4.1-201ENST00000620349 PLXNB1O43157 2135 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 IGKV1D-43A0A0B4J1Z2 117 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 LOC100131303A0A0U1RQF7 123 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 TM9SF1O15321 606 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 JCHAINP01591 159 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 PSMC3P17980 439 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 TCN2P20062 427 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 FCARP24071 287 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 SOAT1P35610 550 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 ST8SIA6P61647 398 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 SPIBQ01892 262 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 TEX19Q8NA77 164 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 ZNF416Q9BWM5 594 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 NLNQ9BYT8 704 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 ERVK-18Q9QC07 812 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 POMT1Q9Y6A1 747 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 CARMIL3Q8ND23 1372 aa0.04□□□□□ -2.4
U4.1-201ENST00000620349 ZNF469Q96JG9 3925 aaPredicted RBP0.04□□□□□ -2.4
U4.1-201ENST00000620349 CACNA1GO43497 2377 aa0.03□□□□□ -2.4
U4.1-201ENST00000620349 FSIP2Q5CZC0 6907 aa0.03□□□□□ -2.4
U4.1-201ENST00000620349 SLC28A1O00337 649 aa0.03□□□□□ -2.4
U4.1-201ENST00000620349 TPD52L2O43399 206 aaKnown RBP0.03□□□□□ -2.4
U4.1-201ENST00000620349 CD5LO43866 347 aa0.03□□□□□ -2.4
U4.1-201ENST00000620349 SRP72O76094 671 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms