RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 SYN1P17600 705 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 PSMB5P28074 263 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 KHKP50053 298 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 E2F1Q01094 437 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 PUM1Q14671 1186 aaKnown RBP eCLIP13.22□□□□□ -0.29
SYN2-205ENST00000620175 FAM76BQ5HYJ3 339 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 LAMTOR1Q6IAA8 161 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 OAFQ86UD1 273 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 C12orf45Q8N5I9 185 aaPredicted RBP13.22□□□□□ -0.29
SYN2-205ENST00000620175 WBP2Q969T9 261 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 GMEB2Q9UKD1 530 aa13.22□□□□□ -0.29
SYN2-205ENST00000620175 POLR2AP24928 1970 aaKnown RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 TRDV1A0A1B0GX56 115 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 DRGXA6NNA5 263 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 F5H5P2 479 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 UBXN7O94888 489 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 LPLP06858 475 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 AIMP2Q13155 320 aaKnown RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 BIKQ13323 160 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 GRB14Q14449 540 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 OTPQ5XKR4 325 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 FIGNL1Q6PIW4 674 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 OR52I2Q8NH67 350 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 TFGQ92734 400 aaPredicted RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 DPF3Q92784 378 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 SRA1Q9HD15 236 aaKnown RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 NEUROD4Q9HD90 331 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 MRPL17Q9NRX2 175 aaKnown RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 KLHL9Q9P2J3 617 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 SLC7A7Q9UM01 511 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 ADAM12O43184 909 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 SLC16A13Q7RTY0 426 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 GTPBP8Q8N3Z3 284 aaPredicted RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 LINC01465Q8N7H1 131 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 TMEM99Q8N816 258 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 OR10G6Q8NH81 332 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 THEM6Q8WUY1 208 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 SMPDL3BQ92485 455 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 POLDIP3Q9BY77 421 aaKnown RBP13.21□□□□□ -0.29
SYN2-205ENST00000620175 C12orf10Q9HB07 376 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 C1GALT1Q9NS00 363 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 EMC3Q9P0I2 261 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.29
SYN2-205ENST00000620175 A0A087WUU8 490 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 DOK2O60496 412 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 PPP1R3DO95685 299 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 ADRA2AP08913 450 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 ZNF3P17036 446 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 CD22P20273 847 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 AK4P27144 223 aaPredicted RBP13.21□□□□□ -0.3
SYN2-205ENST00000620175 MAPK9P45984 424 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 LMAN2Q12907 356 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 TNK1Q13470 666 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 CLLU1Q5K131 121 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 LIMS2Q7Z4I7 341 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 SDR9C7Q8NEX9 313 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 ABHD4Q8TB40 342 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 MARC2Q969Z3 335 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 RNF170Q96K19 258 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 MSLNLQ96KJ4 702 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 SLC22A12Q96S37 553 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 SLC6A7Q99884 636 aa13.21□□□□□ -0.3
SYN2-205ENST00000620175 LRIT2A6NDA9 550 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 PRSS44E7EML9 344 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 ZNF593O00488 134 aaPredicted RBP13.2□□□□□ -0.3
SYN2-205ENST00000620175 NDUFS4O43181 175 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 SOD1P00441 154 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 WNT1P04628 370 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 DBIP07108 87 aaKnown RBP13.2□□□□□ -0.3
SYN2-205ENST00000620175 RRASP10301 218 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 IL1RNP18510 177 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 BMP8BP34820 402 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 CAP1Q01518 475 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 OR5M1Q8NGP8 315 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 STOML3Q8TAV4 291 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 CD300LFQ8TDQ1 290 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 OR5P2Q8WZ92 322 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 CAMK1GQ96NX5 476 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 FOXN4Q96NZ1 517 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 DERL3Q96Q80 235 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
SYN2-205ENST00000620175 TMEM27Q9HBJ8 222 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 SLC6A20Q9NP91 592 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 FTSJ1Q9UET6 329 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 SHOXO15266 292 aa13.2□□□□□ -0.3
SYN2-205ENST00000620175 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms