RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CLCF1Q9UBD9 225 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 DOCK7Q96N67 2140 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 SPG11Q96JI7 2443 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 NPIPB9F8W1W9 429 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 H3BNH8 94 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 RFXANKO14593 260 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 OIP5O43482 229 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 STX11O75558 287 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 TGDSO95455 350 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 AGR2O95994 175 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 C1QCP02747 245 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 IL6P05231 212 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF17P17021 662 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 MSX1P28360 303 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 IDH3AP50213 366 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF136P52737 540 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 AQP5P55064 265 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 HPCAP84074 193 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 FUT5Q11128 374 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 GPR68Q15743 365 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 PLPPR5Q32ZL2 321 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 NDUFAF6Q330K2 333 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 ARHGAP11BQ3KRB8 267 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 KLHL26Q53HC5 615 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 PDZK1Q5T2W1 519 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 MTERF4Q7Z6M4 381 aaKnown RBP14.43□□□□□ -0.1
BRCA1-228ENST00000618469 RNF130Q86XS8 419 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 GRAMD2AQ8IUY3 354 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 MEIOBQ8N635 442 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 TMCO5AQ8N6Q1 288 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 RELL2Q8NC24 303 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-228ENST00000618469 PNPT1Q8TCS8 783 aaKnown RBP14.43□□□□□ -0.1
BRCA1-228ENST00000618469 CKAP2Q8WWK9 683 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 XAGE5Q8WWM1 108 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 C14orf79Q96F83 325 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 MAGEB18Q96M61 343 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 KLHDC3Q9BQ90 382 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF350Q9GZX5 532 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 MED17Q9NVC6 651 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 MKLN1Q9UL63 735 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF337Q9Y3M9 751 aa14.43□□□□□ -0.1
BRCA1-228ENST00000618469 A0A087WZY1 265 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 CENPVL1A0A0U1RR11 272 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 H0YC42 278 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 LINC01387J3KSC0 135 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 KIAA0513O60268 411 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 NUDT14O95848 222 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 TMIGD3P0DMS9 266 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-228ENST00000618469 POLR2JP52435 117 aaKnown RBP14.42□□□□□ -0.1
BRCA1-228ENST00000618469 TPD52P55327 224 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-228ENST00000618469 BCL2A1Q16548 175 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 GLYR1Q49A26 553 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-228ENST00000618469 HEPHL1Q6MZM0 1159 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 CBLN3Q6UW01 205 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF621Q6ZSS3 439 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 CHMP1BQ7LBR1 199 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 ADGRE4PQ86SQ3 457 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 ZBTB8AQ96BR9 441 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 RNF145Q96MT1 663 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 NPAS1Q99742 590 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 NMUR2Q9GZQ4 415 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 RMND5AQ9H871 391 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF446Q9NWS9 450 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 CARD8Q9Y2G2 431 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 WDR45Q9Y484 360 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 DTNAQ9Y4J8 743 aa14.42□□□□□ -0.1
BRCA1-228ENST00000618469 NIPBLQ6KC79 2804 aaeCLIP14.42□□□□□ -0.1
BRCA1-228ENST00000618469 FAM234BA2RU67 622 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 GTPBP1O00178 669 aaKnown RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 FCMRO60667 390 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 ANP32DO95626 131 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 UBL4AP11441 157 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 CD99P14209 185 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 ANXA11P50995 505 aaKnown RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 CCR4P51679 360 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 AGFG1P52594 562 aaKnown RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 SUMO3P55854 103 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 CLDN20P56880 219 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 FOXF1Q12946 379 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 TMEM44Q2T9K0 475 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 GPAT3Q53EU6 434 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 C6orf10Q5SRN2 563 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 MSANTD1Q6ZTZ1 278 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 P4HA3Q7Z4N8 544 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 GCNT2Q8N0V5 402 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 GTPBP8Q8N3Z3 284 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 RFWD2Q8NHY2 731 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 WNT2BQ93097 391 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 VPS33AQ96AX1 596 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 ROPN1LQ96C74 230 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 THOC1Q96FV9 657 aaKnown RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 TM9SF2Q99805 663 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 SPOCK3Q9BQ16 436 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 CCDC28BQ9BUN5 200 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 ENKD1Q9H0I2 346 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 TMEM185BQ9H7F4 350 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 SLC6A13Q9NSD5 602 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 AP4B1Q9Y6B7 739 aa14.41□□□□□ -0.1
BRCA1-228ENST00000618469 INTS1Q8N201 2190 aaKnown RBP14.41□□□□□ -0.1
BRCA1-228ENST00000618469 C7orf72A4D263 438 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms