RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 UBQLN3Q9H347 655 aa14.54□□□□□ -0.08
NR1H3-235ENST00000616973 FN3KQ9H479 309 aa14.54□□□□□ -0.08
NR1H3-235ENST00000616973 Q9N2J8 555 aa14.54□□□□□ -0.08
NR1H3-235ENST00000616973 IRAK4Q9NWZ3 460 aa14.54□□□□□ -0.08
NR1H3-235ENST00000616973 DNAJB12Q9NXW2 375 aaKnown RBP14.54□□□□□ -0.08
NR1H3-235ENST00000616973 RNF215Q9Y6U7 377 aa14.54□□□□□ -0.08
NR1H3-235ENST00000616973 GON4LQ3T8J9 2241 aa14.54□□□□□ -0.08
NR1H3-235ENST00000616973 SPAG17Q6Q759 2223 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 HRKO00198 91 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 STK25O00506 426 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 PFDN1O60925 122 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CDC123O75794 336 aaPredicted RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 RCBTB2O95199 551 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ZGLP1P0C6A0 271 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CT45A8P0DMV1 189 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CT45A9P0DMV2 189 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CD1CP29017 333 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 HTR1FP30939 366 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 SOX6P35712 828 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ACAA2P42765 397 aaKnown RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 GCGRP47871 477 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 FXYD6P3P58550 94 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 BNC1Q01954 994 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 SRSF5Q13243 272 aaKnown RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ERV3-1Q14264 604 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CT45A2Q5DJT8 189 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 SIX5Q8N196 739 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 LSMEM1Q8N8F7 131 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 RCBTB1Q8NDN9 531 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 OR4N2Q8NGD1 307 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 OR52L1Q8NGH7 329 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 PFN4Q8NHR9 129 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ZNF426Q9BUY5 554 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 JAM3Q9BX67 310 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CAPN10Q9HC96 672 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 UCKL1Q9NWZ5 548 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 DTX4Q9Y2E6 619 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 H3BMH7 237 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 KPNA4O00629 521 aaPredicted RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 MAGEB3O15480 346 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CH25HO95992 272 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 IL9P15248 144 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 MAOAP21397 527 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 TBXA2RP21731 343 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ATP12AP54707 1039 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 RPS3AP61247 264 aaKnown RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ZC3H14Q6PJT7 736 aaKnown RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ZNF550Q7Z398 422 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 LNX2Q8N448 690 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 ZNF615Q8N8J6 731 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 MINDY2Q8NBR6 621 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 OR7G1Q8NGA0 311 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 FANK1Q8TC84 345 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 BPIFA2Q96DR5 249 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 MROQ9BYG7 248 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 OR10A5Q9H207 317 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 C20orf141Q9NUB4 165 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 FLRT3Q9NZU0 649 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 LRIT1Q9P2V4 623 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 CBLCQ9ULV8 474 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 TMEM184BQ9Y519 407 aaPredicted RBP14.53□□□□□ -0.08
NR1H3-235ENST00000616973 PEX16Q9Y5Y5 336 aa14.53□□□□□ -0.08
NR1H3-235ENST00000616973 A0A075B6Q4 140 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 A0A1B0GWA3 101 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 BHLHE40O14503 412 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 SDC3O75056 442 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 CLPSP04118 112 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 OCM2P0CE71 109 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 OCMP0CE72 109 aaPredicted RBP14.52□□□□□ -0.09
NR1H3-235ENST00000616973 BMP7P18075 431 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 BCKDHBP21953 392 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 PPM1FP49593 454 aaPredicted RBP14.52□□□□□ -0.09
NR1H3-235ENST00000616973 CSNK1EP49674 416 aaKnown RBP14.52□□□□□ -0.09
NR1H3-235ENST00000616973 TPBGQ13641 420 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.52□□□□□ -0.09
NR1H3-235ENST00000616973 C11orf74Q86VG3 221 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 GID4Q8IVV7 300 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 SLC43A2Q8N370 569 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 C16orf52Q8NHV5 167 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 OIT3Q8WWZ8 545 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 MVB12AQ96EY5 273 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 CNPPD1Q9BV87 410 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 ATP13A2Q9NQ11 1180 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 SEMA5BQ9P283 1151 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 PRODH2Q9UF12 536 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 SSR3Q9UNL2 185 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 ERVK-19Q9WJR5 959 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 SIGLEC7Q9Y286 467 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 CARD8Q9Y2G2 431 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 MMACHCQ9Y4U1 282 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 CSNK1G3Q9Y6M4 447 aa14.52□□□□□ -0.09
NR1H3-235ENST00000616973 ZNF670-ZNF695F2Z2N8 137 aa14.51□□□□□ -0.09
NR1H3-235ENST00000616973 NUDT21O43809 227 aaKnown RBP14.51□□□□□ -0.09
NR1H3-235ENST00000616973 IGHA1P01876 353 aa14.51□□□□□ -0.09
NR1H3-235ENST00000616973 LIMS3P0CW19 117 aa14.51□□□□□ -0.09
NR1H3-235ENST00000616973 LIMS4P0CW20 117 aa14.51□□□□□ -0.09
NR1H3-235ENST00000616973 S100A5P33763 92 aa14.51□□□□□ -0.09
NR1H3-235ENST00000616973 RFX3P48380 749 aa14.51□□□□□ -0.09
NR1H3-235ENST00000616973 RNF144AP50876 292 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms