RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MCUR1Q96AQ8 359 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 TMCO6Q96DC7 493 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 POM121Q96HA1 1249 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 TMEM19Q96HH6 336 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 REXO5Q96IC2 774 aaKnown RBP13.55□□□□□ -0.24
UBXN1-218ENST00000616865 SDF2Q99470 211 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 DEFB127Q9H1M4 99 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 ALG2Q9H553 416 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 TMEM38AQ9H6F2 299 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 POLE3Q9NRF9 147 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 TMEM181Q9P2C4 612 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 PRPF19Q9UMS4 504 aaKnown RBP13.55□□□□□ -0.24
UBXN1-218ENST00000616865 INTS1Q8N201 2190 aaKnown RBP13.55□□□□□ -0.24
UBXN1-218ENST00000616865 ELOVL7A1L3X0 281 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 PINLYPA6NC86 204 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ACOT7O00154 380 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 TSPAN2O60636 221 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 UTS2O95399 124 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 P04436 131 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 TFPTP0C1Z6 253 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 CYP4B1P13584 511 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 CPOXP36551 454 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 GSK3BP49841 420 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 NTRK2Q16620 822 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 VMACQ2NL98 169 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF791Q3KP31 576 aaPredicted RBP13.54□□□□□ -0.24
UBXN1-218ENST00000616865 INTS11Q5TA45 600 aaKnown RBP13.54□□□□□ -0.24
UBXN1-218ENST00000616865 LRRC74BQ6ZQY2 392 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 NET1Q7Z628 596 aaPredicted RBP13.54□□□□□ -0.24
UBXN1-218ENST00000616865 CALHM3Q86XJ0 350 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ZZZ3Q8IYH5 903 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 MICU2Q8IYU8 434 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ARHGAP24Q8N264 748 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 RNF148Q8N7C7 305 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF614Q8N883 585 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 HIPK4Q8NE63 616 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 BBS10Q8TAM1 723 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 FAM110BQ8TC76 370 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 SLC38A5Q8WUX1 472 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 SGCZQ96LD1 299 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 THTPAQ9BU02 230 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 HOXD1Q9GZZ0 328 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 METTL7AQ9H8H3 244 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ZDHHC11Q9H8X9 412 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 ABCD2Q9UBJ2 740 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 MKLN1Q9UL63 735 aa13.54□□□□□ -0.24
UBXN1-218ENST00000616865 A0A0G2JPF8 293 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 HNRNPCL2B2RXH8 293 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 HNRNPCL3B7ZW38 293 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 NPIPA2E9PIF3 369 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 NPIPA3F8WFD2 350 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 SCDO00767 359 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF354AO60765 605 aaPredicted RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 UGT2B11O75310 529 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 DNAJC8O75937 253 aaPredicted RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 STAMBPO95630 424 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 IGKV1D-16P01601 117 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 CHRM4P08173 479 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 HNRNPCL4P0DMR1 293 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 DNAJA1P31689 397 aaKnown RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PCGF2P35227 344 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PGM1P36871 562 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PPIAP62937 165 aaKnown RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PMPCAQ10713 525 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 MYBPHQ13203 477 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 SPATS1Q496A3 300 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PRAMEF8Q5VWM4 474 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PRAMEF7Q5VXH5 474 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 SLC22A10Q63ZE4 541 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 LYPD8Q6UX82 237 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PTOV1Q86YD1 416 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PEX5LQ8IYB4 626 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF619Q8N2I2 560 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 OR2M7Q8NG81 312 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 OR10G3Q8NGC4 313 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 NRGNQ92686 78 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 SLC7A6OSQ96CW6 309 aaPredicted RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF583Q96ND8 569 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF607Q96SK3 696 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 TTTY12Q9BZ98 90 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 TBL1XR1Q9BZK7 514 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF350Q9GZX5 532 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 MTHFD2LQ9H903 347 aaPredicted RBP13.53□□□□□ -0.24
UBXN1-218ENST00000616865 SLC24A3Q9HC58 644 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 UBQLN4Q9NRR5 601 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PNPLA3Q9NST1 481 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 FBXO34Q9NWN3 711 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 KLRF1Q9NZS2 232 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 CNIH4Q9P003 139 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF407Q9C0G0 2248 aa13.52□□□□□ -0.24
UBXN1-218ENST00000616865 MTORP42345 2549 aa13.52□□□□□ -0.24
UBXN1-218ENST00000616865 NPIPA5A0A0B4J1W7 369 aa13.52□□□□□ -0.25
UBXN1-218ENST00000616865 A0A0G2JMM0 328 aa13.52□□□□□ -0.25
UBXN1-218ENST00000616865 A0A1W2PPB8 328 aa13.52□□□□□ -0.25
UBXN1-218ENST00000616865 A0A1W2PRS3 328 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms