RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC38A3Q99624 504 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MCHR1Q99705 422 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SPATA5L1Q9BVQ7 753 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DPH1Q9BZG8 443 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MFFQ9GZY8 342 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.23□□□□□ -1.41
LMO3-235ENST00000616247 TMEM185BQ9H7F4 350 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 IFT22Q9H7X7 185 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 TAC3Q9UHF0 121 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MYO7AQ13402 2215 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 A0A1B0GW55 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 A0A1W2PRQ8 180 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 CASC3O15234 703 aaKnown RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 OR1F1O43749 312 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 KCNJ13O60928 360 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4L2P0CJ85 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4L3P0CJ86 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4L4P0CJ87 422 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4L5P0CJ88 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4L6P0CJ89 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4L7P0CJ90 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 CLUP10909 449 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 CBR1P16152 277 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 NPPBP16860 134 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ATF1P18846 271 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PVALBP20472 110 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 PSMB10P40306 273 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SOX2P48431 317 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 GK2Q14410 553 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 HLXQ14774 488 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 ODF4Q2M2E3 257 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 GSG1LQ6UXU4 331 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 TMEM173Q86WV6 379 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 CACUL1Q86Y37 369 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 OSTF1Q92882 214 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PLD4Q96BZ4 506 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MNTQ99583 582 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DPH7Q9BTV6 452 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ADAT1Q9BUB4 502 aaKnown RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 RSPO3Q9BXY4 272 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 ACTR6Q9GZN1 396 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 OR2AG1Q9H205 316 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 EVA1AQ9H8M9 152 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SYNPO2LQ9H987 977 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SLC6A20Q9NP91 592 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MYNNQ9NPC7 610 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SEMA4GQ9NTN9 838 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ASB6Q9NWX5 421 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 DUX4Q9UBX2 424 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 LSM7Q9UK45 103 aaKnown RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 CDV3Q9UKY7 258 aaKnown RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 ERVK-19Q9WJR5 959 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ARRDC5A6NEK1 342 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MFSD2BA6NFX1 497 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 MCRIP1C9JLW8 97 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 D6RAR5 112 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PI15O43692 258 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 KLHL18O94889 574 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 UBL3O95164 117 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 HMGN2P05204 90 aaKnown RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 CSN2P05814 226 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PTBP1P26599 531 aaKnown RBP eCLIP6.23□□□□□ -1.41
LMO3-235ENST00000616247 GRPRP30550 384 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ANXA11P50995 505 aaKnown RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 TGM3Q08188 693 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ST3GAL3Q11203 375 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 TMEM115Q12893 351 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 PGGHGQ32M88 737 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 EOGTQ5NDL2 527 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SLC24A5Q71RS6 500 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 FCRLAQ7L513 359 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SERINC5Q86VE9 423 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ARIH2OSQ8N7S6 290 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 C2orf69Q8N8R5 385 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 RASGEF1AQ8N9B8 481 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 TMEM255BQ8WV15 326 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SNX33Q8WV41 574 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PTP4A1Q93096 173 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 CXorf40BQ96DE9 158 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 NEURL3Q96EH8 262 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PRRC1Q96M27 445 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PDCD10Q9BUL8 212 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 ZNF471Q9BX82 626 aaPredicted RBP6.23□□□□□ -1.41
LMO3-235ENST00000616247 SHARPINQ9H0F6 387 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 SLC6A17Q9H1V8 727 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 LDAHQ9H6V9 325 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 POT1Q9NUX5 634 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 GLS2Q9UI32 602 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 KIF25Q9UIL4 384 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 PRELID3BQ9Y3B1 194 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 IRAK3Q9Y616 596 aa6.23□□□□□ -1.41
LMO3-235ENST00000616247 LOC100509620A0A075B734 347 aa6.22□□□□□ -1.41
LMO3-235ENST00000616247 TRAV20A0A0B4J274 112 aa6.22□□□□□ -1.41
LMO3-235ENST00000616247 ACOD1A6NK06 481 aa6.22□□□□□ -1.41
LMO3-235ENST00000616247 KPNA3O00505 521 aaPredicted RBP6.22□□□□□ -1.41
LMO3-235ENST00000616247 SLC16A5O15375 505 aa6.22□□□□□ -1.41
LMO3-235ENST00000616247 PRICKLE3O43900 615 aaPredicted RBP6.22□□□□□ -1.41
LMO3-235ENST00000616247 RPP14O95059 124 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms