RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CWH43Q9H720 699 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 CA10Q9NS85 328 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 KCMF1Q9P0J7 381 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 KLK11Q9UBX7 282 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 NPIPB8E9PQR5 432 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 SLCO2B1O94956 709 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 EOMESO95936 686 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 HLA-DQB1P01920 261 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 GRPRP30550 384 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 AKR1C2P52895 323 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 BTG1P62324 171 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 AKR1C1Q04828 323 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 PRAMEF14Q5SWL7 426 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 PRAMEF13Q5VWM6 474 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 FAM198BQ6UWH4 519 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 GDPD4Q6W3E5 623 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 CAMKMTQ7Z624 323 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 OAFQ86UD1 273 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 SLC9B2Q86UD5 537 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 ZCCHC2Q9C0B9 1178 aaKnown RBP12.29□□□□□ -0.44
MSH6-214ENST00000616033 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
MSH6-214ENST00000616033 A0A1W2PRU2 124 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 SLC16A5O15375 505 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 EGFP01133 1207 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 GKN3PP0CG01 181 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 RPL3P39023 403 aaKnown RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 GDNFP39905 211 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 NAA10P41227 235 aaPredicted RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 METAP1P53582 386 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 ODF4Q2M2E3 257 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 SLC36A2Q495M3 483 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 ACSM3Q53FZ2 586 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 TMEM255AQ5JRV8 349 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 VASNQ6EMK4 673 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 TMEM25Q86YD3 366 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 TM4SF18Q96CE8 201 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 GPR174Q9BXC1 333 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 C20orf85Q9H1P6 137 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 TMEM138Q9NPI0 162 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 BABAM2Q9NXR7 383 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 SLC25A13Q9UJS0 675 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 Q9Y3F1 56 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 NPIPA5A0A0B4J1W7 369 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 FAM74A7A6NL05 159 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 NPIPA7E9PJI5 369 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 PDCD5O14737 125 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 FCMRO60667 390 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 NPIPA8P0DM63 369 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 NPR2P20594 1047 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 PSMB10P40306 273 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 FAM74A3Q4VXF1 159 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 CD276Q5ZPR3 534 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 ELP2Q6IA86 826 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 FIP1L1Q6UN15 594 aaKnown RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 GPALPP1Q8IXQ4 340 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 OR5P2Q8WZ92 322 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 DERL3Q96Q80 235 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 OR2M2Q96R28 347 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 NKX3-1Q99801 234 aaPredicted RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 XKR8Q9H6D3 395 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 A0A1W2PRQ8 180 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 ANTXRLA6NF34 631 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 AGAP14A8MT82 685 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 POP4O95707 220 aaKnown RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 INHAP05111 366 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 MAPK8P45983 427 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 GBX2P52951 348 aaPredicted RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 ZNF273Q14593 569 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 APOOLQ6UXV4 268 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 MORN4Q8NDC4 146 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 WNT2BQ93097 391 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 GLYATL1Q969I3 302 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 YIPF5Q969M3 257 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 KLHL15Q96M94 604 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 MCHR1Q99705 422 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 BCL2L14Q9BZR8 327 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 FGF20Q9NP95 211 aaPredicted RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 AHSPQ9NZD4 102 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 SCP2D1Q9UJQ7 156 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 RPH3AQ9Y2J0 694 aaPredicted RBP12.28□□□□□ -0.44
MSH6-214ENST00000616033 IRAK3Q9Y616 596 aa12.28□□□□□ -0.44
MSH6-214ENST00000616033 CDC42EP2O14613 210 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 NPC1O15118 1278 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 EPPINO95925 133 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 FGBP02675 491 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 RAB3BP20337 219 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 LGALS3BPQ08380 585 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 HTR4Q13639 388 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 RBMS2Q15434 407 aaKnown RBP12.27□□□□□ -0.44
MSH6-214ENST00000616033 BEX5Q5H9J7 111 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 CCNJQ5T5M9 372 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 PYHIN1Q6K0P9 492 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 C1orf94Q6P1W5 598 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 LNX2Q8N448 690 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 OR9A1PQ8NGU1 263 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 CA5BP1Q8WTZ4 195 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms