RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ALDH3B2P48448 385 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 RAB38P57729 211 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF91Q05481 1191 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 BTBD16Q32M84 506 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 BORAQ6PGQ7 559 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 PAQR6Q6TCH4 344 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ACBD7Q8N6N7 88 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC16A11Q8NCK7 471 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 RSC1A1Q92681 617 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM38AQ9H6F2 299 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 DHCR7Q9UBM7 475 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 KIR2DS5A0A0G2JLQ3 304 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 A0A0G2JNG1 304 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 TVP23AA6NH52 213 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 C2CD4DB7Z1M9 353 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 KIR2DS3K7RE56 304 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 F13BP05160 661 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 GSTT2BP0CG30 244 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CCNOP22674 350 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CD38P28907 300 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 KCNJ5P48544 419 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 MRPS21P82921 87 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 KIR2DS5Q14953 304 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 UBQLNLQ8IYU4 475 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 OR6C4Q8NGE1 309 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 OR52I1Q8NGK6 324 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 OR6Q1Q8NGQ2 317 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 PMM1Q92871 262 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 DAZLQ92904 295 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 HRASLS5Q96KN8 279 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 TCEAL2Q9H3H9 227 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CHMP1AQ9HD42 196 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ACER3Q9NUN7 267 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 AK6Q9Y3D8 172 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ENTPD2Q9Y5L3 495 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 OTOL1A6NHN0 477 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 AK1P00568 194 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 KLK3P07288 261 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 HCCSP53701 268 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ISL1P61371 349 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CNIH2Q6PI25 160 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 DCDC5Q6ZRR9 648 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 HDDC2Q7Z4H3 204 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 TMPRSS12Q86WS5 348 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF101Q8IZC7 436 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ATOH1Q92858 354 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 FKBP10Q96AY3 582 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ELF4Q99607 663 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ATG5Q9H1Y0 275 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 KCNE3Q9Y6H6 103 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CDH10Q9Y6N8 788 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 GFRA2O00451 464 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 GPR75O95800 540 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 HCKP08631 526 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ACP2P11117 423 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 HYAL1Q12794 435 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 SGCAQ16586 387 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 NKAIN4Q8IVV8 208 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 OR7G2Q8NG99 324 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC35A4Q96G79 324 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CSF3RQ99062 836 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 FAIMQ9NVQ4 179 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 NFKBIL1Q9UBC1 381 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ARL6IP5O75915 188 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CEACAM5P06731 702 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 HTRA4P83105 476 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 MESP2Q0VG99 397 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM196Q5HYL7 178 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM184AQ6ZMB5 413 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 MEPCEQ7L2J0 689 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 LAX1Q8IWV1 398 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ELP4Q96EB1 424 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 OR1F2PQ96R84 312 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 CUTCQ9NTM9 273 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF226Q9NYT6 803 aa8.33□□□□□ -1.08
PDLIM5-222ENST00000615540 MEIS3P1A6NDR6 274 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF701M0R085 212 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CLEC2LP0C7M8 214 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 PGCP20142 388 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TGM4P49221 684 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 PPP5CP53041 499 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CXCR4P61073 352 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 EIF2B1Q14232 305 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 NR0B2Q15466 257 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 C6orf183Q5T699 404 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TMED4Q7Z7H5 227 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 PEG10Q86TG7 708 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SLITRK4Q8IW52 837 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 DHDHQ9UQ10 334 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF236Q9UL36 1845 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 OR2A25A4D2G3 310 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 LRRN3E7EW58 273 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CTDSP2O14595 271 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 PRODHO43272 600 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CHRM4P08173 479 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ANK1P16157 1881 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 MMP11P24347 488 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 OTX2P32243 289 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms