RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ANK3Q12955 4377 aaKnown RBP15.89■□□□□ 0.13
SSBP1-215ENST00000612337 TMEM114B3SHH9 223 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 SCAMP2O15127 329 aaKnown RBP15.88■□□□□ 0.13
SSBP1-215ENST00000612337 HMGN2P05204 90 aaKnown RBP15.88■□□□□ 0.13
SSBP1-215ENST00000612337 CHRNGP07510 517 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 LINGO3P0C6S8 592 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 RPL3P39023 403 aaKnown RBP15.88■□□□□ 0.13
SSBP1-215ENST00000612337 EIF1P41567 113 aaKnown RBP15.88■□□□□ 0.13
SSBP1-215ENST00000612337 LASP1Q14847 261 aaKnown RBP15.88■□□□□ 0.13
SSBP1-215ENST00000612337 GTF2IRD2BQ6EKJ0 949 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 PLEKHM3Q6ZWE6 761 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 MTERF4Q7Z6M4 381 aaKnown RBP15.88■□□□□ 0.13
SSBP1-215ENST00000612337 GTF2IRD2Q86UP8 949 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 STK32CQ86UX6 486 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 LILRA2Q8N149 483 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 IGFBPL1Q8WX77 278 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 OSTF1Q92882 214 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 KLHDC3Q9BQ90 382 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 OR10A4Q9H209 315 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 PIGUQ9H490 435 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 MKS1Q9NXB0 559 aa15.88■□□□□ 0.13
SSBP1-215ENST00000612337 HIVEP2P31629 2446 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 USF3Q68DE3 2245 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 TMEM233B4DJY2 109 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 NPHS1O60500 1241 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 TUBBP07437 444 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 PABPC4LP0CB38 370 aaKnown RBP15.87■□□□□ 0.13
SSBP1-215ENST00000612337 ELK4P28324 431 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 MAPK1P28482 360 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 AGTR1P30556 359 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 NR1H2P55055 460 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 CARD18P57730 90 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 ZNF117Q03924 483 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 ZNF704Q6ZNC4 412 aaPredicted RBP15.87■□□□□ 0.13
SSBP1-215ENST00000612337 OR7A2PQ8NGA2 310 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 PHOSPHO1Q8TCT1 267 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 CDS1Q92903 461 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 CHMP6Q96FZ7 201 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 APOPT1Q96IL0 206 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 PPP3R2Q96LZ3 170 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 ACTR6Q9GZN1 396 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 EML4Q9HC35 981 aaKnown RBP15.87■□□□□ 0.13
SSBP1-215ENST00000612337 GPR52Q9Y2T5 361 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 SNX8Q9Y5X2 465 aa15.87■□□□□ 0.13
SSBP1-215ENST00000612337 NUP214P35658 2090 aaPredicted RBP15.87■□□□□ 0.13
SSBP1-215ENST00000612337 HAX1O00165 279 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 TMCC2O75069 709 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 LAMP1P11279 417 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 NID1P14543 1247 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 PAX1P15863 534 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 PSMB1P20618 241 aaKnown RBP15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ATP6V1C1P21283 382 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ADH6P28332 368 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ALDH3A1P30838 453 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 SFTPDP35247 375 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 PTH2RP49190 550 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 FOXF1Q12946 379 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ZNF239Q16600 458 aaKnown RBP15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ARL13AQ5H913 290 aaPredicted RBP15.86■□□□□ 0.13
SSBP1-215ENST00000612337 CDC73Q6P1J9 531 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 BANPQ8N9N5 519 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ZNF527Q8NB42 609 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 PSMA8Q8TAA3 256 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 RNF128Q8TEB7 428 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 OR5P2Q8WZ92 322 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 PLPPR2Q96GM1 343 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 REXO5Q96IC2 774 aaKnown RBP15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ACTRT3Q9BYD9 372 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 HOXD1Q9GZZ0 328 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 C12orf49Q9H741 205 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 TIGARQ9NQ88 270 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 ACTL7BQ9Y614 415 aa15.86■□□□□ 0.13
SSBP1-215ENST00000612337 TRIM64A6NGJ6 449 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 TRIM64BA6NI03 449 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 SMAD7O15105 426 aaKnown RBP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 SOX30O94993 753 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 SHC1P29353 583 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 CCT3P49368 545 aaKnown RBP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 P2RX1P51575 399 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 SUMO3P55854 103 aaPredicted RBP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 PTGR1Q14914 329 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 RNPS1Q15287 305 aaKnown RBP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 KLHL26Q53HC5 615 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 XKR7Q5GH72 579 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 CBLN3Q6UW01 205 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 WFDC8Q8IUA0 241 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 NATD1Q8N6N6 113 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 OR56A1Q8NGH5 318 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 ADAMTS15Q8TE58 950 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 TMEM171Q8WVE6 324 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 ROBO4Q8WZ75 1007 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 CPNE4Q96A23 557 aaPredicted RBP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 TMEM204Q9BSN7 226 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 GIMAP2Q9UG22 337 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 ICAM5Q9UMF0 924 aa15.85■□□□□ 0.13
SSBP1-215ENST00000612337 GPC6Q9Y625 555 aaPredicted RBP15.85■□□□□ 0.13
SSBP1-215ENST00000612337 GJE1A6NN92 205 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 H3BNH8 94 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms