RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SPATA24Q86W54 205 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 ZBED8Q8IZ13 594 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 SPAG16Q8N0X2 631 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 PDCL2Q8N4E4 241 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 BPIFB2Q8N4F0 458 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 OR5AU1Q8NGC0 362 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 CCDC26Q8TAB7 109 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 MRAPQ8TCY5 172 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 NRBF2Q96F24 287 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 SERAC1Q96JX3 654 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 TESK2Q96S53 571 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 FEM1AQ9BSK4 669 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 MRPL13Q9BYD1 178 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 GSDMCQ9BYG8 508 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 STMN4Q9H169 189 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 SLC25A51Q9H1U9 297 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 WDR76Q9H967 626 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 COG4Q9H9E3 785 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 MIEF1Q9NQG6 463 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 EHFQ9NZC4 300 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 VSIG4Q9Y279 399 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 MAP3K19Q56UN5 1328 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 WDR19Q8NEZ3 1342 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 IGLV3-10A0A075B6K4 115 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 FRG2CA6NGY1 282 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 ZSCAN5BA6NJL1 495 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 FAM74A7A6NL05 159 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 FAM220BPB1ANY3 271 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 F8VZ95 297 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CACNG3O60359 315 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 JAK2O60674 1132 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 FGFR1OPO95684 399 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CCDC172P0C7W6 258 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 BCKDHAP12694 445 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 XRCC1P18887 633 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 PTBP1P26599 531 aaKnown RBP eCLIP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 RPL4P36578 427 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 DLSTP36957 453 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 MDH1P40925 334 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 NOVA1P51513 510 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 HADHBP55084 474 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 ERVPABLB-1P60509 514 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 ELP6Q0PNE2 266 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 RIPK1Q13546 671 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 DPYSL2Q16555 572 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 IMMTQ16891 758 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 GLYR1Q49A26 553 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CFAP221Q4G0U5 840 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 FILIP1LQ4L180 1135 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 FAM74A3Q4VXF1 159 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 TEX44Q53QW1 395 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 PAN3Q58A45 887 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 TMEM41BQ5BJD5 291 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 SPATA46Q5T0L3 261 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 SLC22A10Q63ZE4 541 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 STAC2Q6ZMT1 411 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CYS1Q717R9 158 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 IFNEQ86WN2 208 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CDH26Q8IXH8 852 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CENPLQ8N0S6 344 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 ZSCAN4Q8NAM6 433 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 OR52M1Q8NGK5 317 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 ADAMTS16Q8TE57 1224 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 TCEANC2Q96MN5 208 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CASD1Q96PB1 797 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 TMEM121Q9BTD3 319 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF416Q9BWM5 594 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 GLT8D2Q9H1C3 349 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 POLR3FQ9H1D9 316 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 IKZF5Q9H5V7 419 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 DHX33Q9H6R0 707 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 COQ10BQ9H8M1 238 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 CRLS1Q9UJA2 301 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 B9D1Q9UPM9 204 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 MFHAS1Q9Y4C4 1052 aa3.2□□□□□ -1.9
SMCHD1-213ENST00000609587 TTC41PQ6P2S7 1318 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 A0A1B0GWJ7 208 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 DUX1O43812 170 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 TRIM3O75382 744 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 CTAG2O75638 210 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 MBD3O95983 291 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 KRT6BP04259 564 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 IGHV1-2P23083 117 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 NF2P35240 595 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 GNPDA1P46926 289 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 KRT6CP48668 564 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 MEOX2P50222 304 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 NTHL1P78549 312 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 NUCB2P80303 420 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 GPM6BQ13491 265 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 LINC01620Q4KN68 170 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 ASPHD2Q6ICH7 369 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 OR8G2PQ6IF36 304 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 CBLN3Q6UW01 205 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 LANCL3Q6ZV70 420 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF573Q86YE8 665 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 C9orf40Q8IXQ3 194 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 CSNK1A1LQ8N752 337 aa3.19□□□□□ -1.9
SMCHD1-213ENST00000609587 AGR3Q8TD06 166 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms