RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 BTBD2Q9BX70 525 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 GSX2Q9BZM3 304 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 RTN4RQ9BZR6 473 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 PRDM14Q9GZV8 571 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 ACBD3Q9H3P7 528 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 PIGUQ9H490 435 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 VIPAS39Q9H9C1 493 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 CALHM2Q9HA72 323 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 DUSP22Q9NRW4 184 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 MED11Q9P086 117 aa17.35■□□□□ 0.37
SGMS1-208ENST00000608287 B4DXG7 233 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 CPSF4O95639 269 aaKnown RBP17.34■□□□□ 0.37
SGMS1-208ENST00000608287 ANGPTL1O95841 491 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 F12P00748 615 aaPredicted RBP17.34■□□□□ 0.37
SGMS1-208ENST00000608287 DSCR4P56555 118 aaPredicted RBP17.34■□□□□ 0.37
SGMS1-208ENST00000608287 UFM1P61960 85 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 DMTNQ08495 405 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 ACKR1Q16570 336 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.34■□□□□ 0.37
SGMS1-208ENST00000608287 DPY19L1Q2PZI1 675 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 SLC9B1Q4ZJI4 515 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 SPANXN4Q5MJ08 99 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 ANXA8L1Q5VT79 327 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 ZAR1Q86SH2 424 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 ANKRD46Q86W74 232 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 FADS6Q8N9I5 356 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 VPS37AQ8NEZ2 397 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 OR2M3Q8NG83 312 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 OR4C3Q8NH37 302 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 LRRC8CQ8TDW0 803 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 WDYHV1Q96HA8 205 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 G6PC3Q9BUM1 346 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 GPATCH2Q9NW75 528 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 FBXO34Q9NWN3 711 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 GIN1Q9NXP7 522 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 ZNF226Q9NYT6 803 aa17.34■□□□□ 0.37
SGMS1-208ENST00000608287 PRSS51A0A1B0GVH4 220 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 A0A1W2PPR1 153 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 HMGB1P1B2RPK0 211 aaPredicted RBP17.33■□□□□ 0.36
SGMS1-208ENST00000608287 E9PBE3 544 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 TMCC2O75069 709 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 OXSR1O95747 527 aaPredicted RBP17.33■□□□□ 0.36
SGMS1-208ENST00000608287 HPGDP15428 266 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 S100A3P33764 101 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 C17orf67Q0P5P2 114 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 FAM174BQ3ZCQ3 159 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 AAGABQ6PD74 315 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 ENPP6Q6UWR7 440 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 APOOLQ6UXV4 268 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 CLEC4FQ8N1N0 589 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 DYDC1Q8WWB3 177 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 TEX37Q96LM6 180 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 SFXN2Q96NB2 322 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 TRIB1Q96RU8 372 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 PIGMQ9H3S5 423 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 PTGES2Q9H7Z7 377 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 GALNT8Q9NY28 637 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 MRPS18CQ9Y3D5 142 aaKnown RBP17.33■□□□□ 0.36
SGMS1-208ENST00000608287 DOCK7Q96N67 2140 aa17.33■□□□□ 0.36
SGMS1-208ENST00000608287 SONP18583 2426 aaKnown RBP17.32■□□□□ 0.36
SGMS1-208ENST00000608287 RNF103-CHMP3A0A140T963 221 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 GMFGO60234 142 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 TMIGD3P0DMS9 266 aaPredicted RBP17.32■□□□□ 0.36
SGMS1-208ENST00000608287 HK1P19367 917 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 ATP6V1C1P21283 382 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 TBXA2RP21731 343 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 GFRA1P56159 465 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 PHC1P78364 1004 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 HEPHL1Q6MZM0 1159 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 MAVSQ7Z434 540 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 C6orf120Q7Z4R8 191 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 GATSQ8NAP1 163 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 MAELQ96JY0 434 aaKnown RBP17.32■□□□□ 0.36
SGMS1-208ENST00000608287 SLC35G5Q96KT7 338 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 OR7D2Q96RA2 312 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 ZBTB18Q99592 522 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 UBQLN4Q9NRR5 601 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 GPR45Q9Y5Y3 372 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 KCNE3Q9Y6H6 103 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 ZANQ9Y493 2812 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 MED12Q93074 2177 aa17.32■□□□□ 0.36
SGMS1-208ENST00000608287 DSCAMO60469 2012 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 KDM4EB2RXH2 506 aaPredicted RBP17.31■□□□□ 0.36
SGMS1-208ENST00000608287 ALG1L2C9J202 215 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 C9JVG2 144 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 SCDO00767 359 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 NDUFB5O43674 189 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 ZIC3O60481 467 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 SCN2BO60939 215 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 SOX30O94993 753 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 TP53P04637 393 aaPredicted RBP17.31■□□□□ 0.36
SGMS1-208ENST00000608287 NGFRP08138 427 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 MATN1P21941 496 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 LCN1P31025 176 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 STARP49675 285 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 RPS26P62854 115 aaKnown RBP17.31■□□□□ 0.36
SGMS1-208ENST00000608287 SRYQ05066 204 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 GANABQ14697 944 aaKnown RBP17.31■□□□□ 0.36
SGMS1-208ENST00000608287 DCST2Q5T1A1 773 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 RAET1LQ5VY80 246 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms