RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 NID1P14543 1247 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 CD46P15529 392 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 NME2P22392 152 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 PTGDSP41222 190 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 CLK3P49761 638 aaKnown RBP10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 CRYBA2P53672 197 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 FGFBP1Q14512 234 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 LARS2Q15031 903 aaKnown RBP10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 GPR68Q15743 365 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 MAPK14Q16539 360 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 LIN52Q52LA3 116 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 SPINK14Q6IE38 97 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 LCN8Q6JVE9 175 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 SLC25A25Q6KCM7 469 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 APOOLQ6UXV4 268 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 MDGA2Q7Z553 956 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 EID3Q8N140 333 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 TMEM178AQ8NBL3 297 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 FAM13CQ8NE31 585 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 FAM71CQ8NEG0 241 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 TOR1AIP2Q8NFQ8 470 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 ZG16BQ96DA0 208 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 TMEM41AQ96HV5 264 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 SIGLEC12Q96PQ1 595 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 PIF1Q9H611 641 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 ARMC7Q9H6L4 198 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 PROK2Q9HC23 129 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 EXOSC3Q9NQT5 275 aaKnown RBP10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 SDHAF3Q9NRP4 125 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 SACM1LQ9NTJ5 587 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 OLAHQ9NV23 265 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 PLA2G3Q9NZ20 509 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 GMPR2Q9P2T1 348 aaKnown RBP10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 SLC35A3Q9Y2D2 325 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 KLF13Q9Y2Y9 288 aaPredicted RBP10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 FREM3P0C091 2139 aa10.64□□□□□ -0.71
CHMP2A-207ENST00000600804 PKDREJQ9NTG1 2253 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 CDHR4A6H8M9 788 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 SERINC4A6NH21 518 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 ACOT8O14734 319 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 GSTA4O15217 222 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 EIF4E2O60573 245 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 TRIM3O75382 744 aaPredicted RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 GMNNO75496 209 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 SP1P08047 785 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 CCL3P10147 92 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 PRF1P14222 555 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 HPGDP15428 266 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 IL7RP16871 459 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 CNR1P21554 472 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 MSX1P28360 303 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 RFX3P48380 749 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 KCNJ5P48544 419 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 EEF1A1P68104 462 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 KCNJ10P78508 379 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 INAQ16352 499 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 HYAL4Q2M3T9 481 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 EIPR1Q53HC9 387 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 RPS26P11Q5JNZ5 115 aaPredicted RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 PDZK1Q5T2W1 519 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 GLYATQ6IB77 296 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 DESI1Q6ICB0 168 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 RPUSD3Q6P087 351 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 ARMC8Q8IUR7 673 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 RNF148Q8N7C7 305 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 FAM156AQ8NDB6 213 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 OR52P1PQ8NH57 321 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 WDR60Q8WVS4 1066 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 TAMM41Q96BW9 452 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 CLPTM1LQ96KA5 538 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 C5orf34Q96MH7 638 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 OSBPL11Q9BXB4 747 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 PINK1Q9BXM7 581 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 TBL1XR1Q9BZK7 514 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 METTL7AQ9H8H3 244 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 CACYBPQ9HB71 228 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 DCAF13Q9NV06 445 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 FLRT3Q9NZU0 649 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 SEC14L3Q9UDX4 400 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 SLC7A8Q9UHI5 535 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 ZNF443Q9Y2A4 671 aaPredicted RBP10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 CHST2Q9Y4C5 530 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 WIF1Q9Y5W5 379 aa10.63□□□□□ -0.71
CHMP2A-207ENST00000600804 ITPR3Q14573 2671 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 MED13LQ71F56 2210 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 ZNF407Q9C0G0 2248 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 CFAP73A6NFT4 308 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 AQP12BA6NM10 295 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 TMEM229AB2RXF0 380 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 SNPHO15079 494 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 ARPC2O15144 300 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 NDUFB5O43674 189 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 PDE5AO76074 875 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 ANGPTL1O95841 491 aa10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 HOXB6P17509 224 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 TCN1P20061 433 aaPredicted RBP10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 ELAVL4P26378 380 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-207ENST00000600804 SUMO3P55854 103 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms