RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LDB3O75112 727 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 CA3P07451 260 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 CPMP14384 443 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 OR1Q1Q15612 314 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 EIPR1Q53HC9 387 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 THSD4Q6ZMP0 1018 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 YIPF7Q8N8F6 280 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 DUSP18Q8NEJ0 188 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 OR10H4Q8NGA5 316 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 OR4M2Q8NGB6 313 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 OR52L1Q8NGH7 329 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 PHOSPHO2Q8TCD6 241 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 TMEM239Q8WW34 195 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 OR1E3Q8WZA6 343 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 KISS1RQ969F8 398 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 SCARF2Q96GP6 870 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 RIPOR3Q96MK2 946 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 HS6ST2Q96MM7 605 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 OR2A5Q96R48 311 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 WACQ9BTA9 647 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF350Q9GZX5 532 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 PHF11Q9UIL8 331 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 ANKRD34BA5PLL1 514 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 OR6C70A6NIJ9 312 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 SLC16A1P53985 500 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 RIN1Q13671 783 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 SUZ12Q15022 739 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 PRPF38BQ5VTL8 546 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 FLVCR1-AS1Q8TAF5 88 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 SMAP2Q8WU79 429 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 HERVK_113Q902F9 699 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 SERINC2Q96SA4 455 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 CLDND1Q9NY35 253 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 EXTL2Q9UBQ6 330 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 F5P12259 2224 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 DAPL1A0PJW8 107 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 LRRC72A6NJI9 287 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 E9PI62 339 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 THBS1P07996 1170 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 MRPL3P09001 348 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 BMP7P18075 431 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 CFL1P23528 166 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 GDI1P31150 447 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 INPP1P49441 399 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 CCDC85BQ15834 202 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 DCST2Q5T1A1 773 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF57Q68EA5 555 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM109BQ6ICB4 259 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 ENPP7Q6UWV6 458 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 TRILQ7L0X0 811 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 PRSS41Q7RTY9 318 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF619Q8N2I2 560 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 OR13C2Q8NGS9 318 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 SLX1AQ9BQ83 275 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 C1QTNF7Q9BXJ2 289 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 KCNN2Q9H2S1 579 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 PIGUQ9H490 435 aa18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 MRPS2Q9Y399 296 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-225ENST00000600733 LOC105369274A0A096LPK9 316 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 B3GALT2O43825 422 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 LYPD3O95274 346 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SMIM10L1P0DMW3 83 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SHC1P29353 583 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 KIR2DL1P43626 348 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 RPS7P62081 194 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SNAP47Q5SQN1 464 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 FIGNL1Q6PIW4 674 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 ARL9Q6T311 187 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 USP53Q70EK8 1073 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 OR4N4Q8N0Y3 316 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SLC37A3Q8NCC5 494 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 PTP4A1Q93096 173 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 TSACCQ96A04 125 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 TM4SF19Q96DZ7 209 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SMIM10Q96HG1 83 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 OR51V1Q9H2C8 321 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 ADAM30Q9UKF2 790 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 A0A1B0GVC2 190 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 A6NIN4 97 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 K7EQS6 105 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 STX11O75558 287 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 CLUP10909 449 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 NID1P14543 1247 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 PTBP1P26599 531 aaKnown RBP eCLIP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 TLX1P31314 330 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 MTNR1BP49286 362 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 CLDN20P56880 219 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 BDH1Q02338 343 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 ADAM15Q13444 863 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 EFR3AQ14156 821 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SF3A2Q15428 464 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 FHL5Q5TD97 284 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 VASH1Q7L8A9 365 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 SAMD14Q8IZD0 417 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 LNX2Q8N448 690 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 OR5W2Q8NH69 310 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 GFM1Q96RP9 751 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 RPP25Q9BUL9 199 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 IFT27Q9BW83 186 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 C19orf53Q9UNZ5 99 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms