RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ZNF385DQ9H6B1 395 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 CALHM2Q9HA72 323 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 CHST11Q9NPF2 352 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 SLC52A3Q9NQ40 469 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 SLC6A13Q9NSD5 602 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 HEATR5AQ86XA9 2040 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 MED12Q93074 2177 aa14.63□□□□□ -0.07
LSM4-206ENST00000600289 A0A0G2JNJ9 132 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 OR2M5A3KFT3 312 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 HCRTR2O43614 444 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 FCMRO60667 390 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 GSNP06396 782 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 HTR1EP28566 365 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 ZNF117Q03924 483 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 PLPPR5Q32ZL2 321 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 RAET1LQ5VY80 246 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 METTL21CQ5VZV1 264 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 TYW3Q6IPR3 259 aaKnown RBP14.62□□□□□ -0.07
LSM4-206ENST00000600289 TNFAIP8L2Q6P589 184 aaPredicted RBP14.62□□□□□ -0.07
LSM4-206ENST00000600289 GDF7Q7Z4P5 450 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 GTPBP8Q8N3Z3 284 aaPredicted RBP14.62□□□□□ -0.07
LSM4-206ENST00000600289 GATSQ8NAP1 163 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 ACBD4Q8NC06 268 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 TOR1AIP2Q8NFQ8 470 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 PMM1Q92871 262 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 VPS33AQ96AX1 596 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 TRNT1Q96Q11 434 aaKnown RBP14.62□□□□□ -0.07
LSM4-206ENST00000600289 PAIP1Q9H074 479 aaKnown RBP14.62□□□□□ -0.07
LSM4-206ENST00000600289 RABEP2Q9H5N1 569 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 NPHS2Q9NP85 383 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 ALKBH4Q9NXW9 302 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 Q9UFV3 132 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 ICAM5Q9UMF0 924 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 TRIM33Q9UPN9 1127 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 GMEB1Q9Y692 573 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 AP4B1Q9Y6B7 739 aa14.62□□□□□ -0.07
LSM4-206ENST00000600289 NPIPA5A0A0B4J1W7 369 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 PRAMEF27A3QJZ7 478 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 HSPB2A8KAH6 182 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 NPIPA7E9PJI5 369 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 H0Y3Z8 333 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 EIF4E2O60573 245 aaKnown RBP14.61□□□□□ -0.07
LSM4-206ENST00000600289 TNFRSF21O75509 655 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 UGT2B17O75795 530 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 TOXO94900 526 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 ANP32DO95626 131 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 C1QCP02747 245 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 NPIPA8P0DM63 369 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 PSMA4P25789 261 aaKnown RBP14.61□□□□□ -0.07
LSM4-206ENST00000600289 P2RX1P51575 399 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 CASP9P55211 416 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 HSPB2Q16082 182 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 LRIF1Q5T3J3 769 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 ARSKQ6UWY0 536 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 FRRS1Q6ZNA5 592 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 MED12LQ86YW9 2145 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 ZNF619Q8N2I2 560 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 RFWD2Q8NHY2 731 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 PHOSPHO1Q8TCT1 267 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 XAGE5Q8WWM1 108 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 RAB8BQ92930 207 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 SPDL1Q96EA4 605 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 ARSGQ96EG1 525 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 ZFP3Q96NJ6 502 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 TUBA1CQ9BQE3 449 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 RUBCNLQ9H714 662 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 TPT1P8Q9HAU6 139 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 MED17Q9NVC6 651 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 KCNE5Q9UJ90 142 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 RPH3AQ9Y2J0 694 aaPredicted RBP14.61□□□□□ -0.07
LSM4-206ENST00000600289 WDR45Q9Y484 360 aa14.61□□□□□ -0.07
LSM4-206ENST00000600289 A0A096LPI6 279 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 SERINC4A6NH21 518 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 ETV2O00321 342 aaPredicted RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 ZNF264O43296 627 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 DNAJA2O60884 412 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 LINGO3P0C6S8 592 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 UBL4AP11441 157 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 EIF1P41567 113 aaKnown RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 STARP49675 285 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 ZNF41P51814 821 aaPredicted RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 EEFSECP57772 596 aaKnown RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 HPCAP84074 193 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 TFF3Q07654 80 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 FGFBP1Q14512 234 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 GPR68Q15743 365 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 COX20Q5RI15 118 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 PDZK1Q5T2W1 519 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 SLC2A7Q6PXP3 512 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 CBLN3Q6UW01 205 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 DNAJC14Q6Y2X3 702 aaPredicted RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 LRRC74BQ6ZQY2 392 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 CCDC71Q8IV32 467 aaPredicted RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 MEIOBQ8N635 442 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 FAM71CQ8NEG0 241 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 SH3YL1Q96HL8 342 aaPredicted RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 TRIB1Q96RU8 372 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 MRGBPQ9NV56 204 aa14.6□□□□□ -0.07
LSM4-206ENST00000600289 THUMPD1Q9NXG2 353 aaKnown RBP14.6□□□□□ -0.07
LSM4-206ENST00000600289 CCDC167Q9P0B6 97 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms