RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DPY30Q9C005 99 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 BEX4Q9NWD9 120 aaPredicted RBP16.84■□□□□ 0.29
PNKP-213ENST00000599543 C6orf203Q9P0P8 240 aaPredicted RBP16.84■□□□□ 0.29
PNKP-213ENST00000599543 NTMQ9P121 344 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 EIF1AYO14602 144 aaKnown RBP16.83■□□□□ 0.28
PNKP-213ENST00000599543 KCNK2O95069 426 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 OXSR1O95747 527 aaPredicted RBP16.83■□□□□ 0.28
PNKP-213ENST00000599543 NGFRP08138 427 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 CD8BP10966 210 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 ACP2P11117 423 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 FOSL1P15407 271 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 CD53P19397 219 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 NUP214P35658 2090 aaPredicted RBP16.83■□□□□ 0.28
PNKP-213ENST00000599543 EIF1AXP47813 144 aaKnown RBP16.83■□□□□ 0.28
PNKP-213ENST00000599543 ZNF41P51814 821 aaPredicted RBP16.83■□□□□ 0.28
PNKP-213ENST00000599543 CLDN8P56748 225 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 UFM1P61960 85 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 GUCY1A3Q02108 690 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.83■□□□□ 0.28
PNKP-213ENST00000599543 SMU1Q2TAY7 513 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 OR4F3Q6IEY1 312 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 MFSD12Q6NUT3 480 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 FIGNL1Q6PIW4 674 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 R3HCC1LQ7Z5L2 792 aaKnown RBP16.83■□□□□ 0.28
PNKP-213ENST00000599543 GGNQ86UU5 652 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 COX18Q8N8Q8 333 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 GATSQ8NAP1 163 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 SLC16A11Q8NCK7 471 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 WFDC11Q8NEX6 87 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 OR4C3Q8NH37 302 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 MTERF3Q96E29 417 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 GIMAP5Q96F15 307 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 WFIKKN1Q96NZ8 548 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 PRRG4Q9BZD6 226 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 DLL4Q9NR61 685 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 AIG1Q9NVV5 245 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 PROCRQ9UNN8 238 aa16.83■□□□□ 0.28
PNKP-213ENST00000599543 A0A087WZY1 265 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 A0A1W2PRB8 838 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 C16orf97H3BN30 126 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 ANKRD28O15084 1053 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 C6orf47O95873 294 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 PLGP00747 810 aaPredicted RBP16.82■□□□□ 0.28
PNKP-213ENST00000599543 CGAP01215 116 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 ALOX5P09917 674 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 PRPS1L1P21108 318 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 TBXA2RP21731 343 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 CCKARP32238 428 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 IDH3AP50213 366 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 AQP5P55064 265 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 DUSP5Q16690 384 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 TMEM44Q2T9K0 475 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 LSM12Q3MHD2 195 aaKnown RBP16.82■□□□□ 0.28
PNKP-213ENST00000599543 OGFOD2Q6N063 350 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 EPGNQ6UW88 154 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 FAM214BQ7L5A3 538 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 CLECL1Q8IZS7 167 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 RFWD2Q8NHY2 731 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 ZBTB8AQ96BR9 441 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 OTUB1Q96FW1 271 aaPredicted RBP16.82■□□□□ 0.28
PNKP-213ENST00000599543 CHMP6Q96FZ7 201 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 POM121Q96HA1 1249 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 MAELQ96JY0 434 aaKnown RBP16.82■□□□□ 0.28
PNKP-213ENST00000599543 DUSP26Q9BV47 211 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 MED4Q9NPJ6 270 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 EMC9Q9Y3B6 208 aa16.82■□□□□ 0.28
PNKP-213ENST00000599543 HEATR5AQ86XA9 2040 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 E9PBE3 544 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 SCDO00767 359 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 ATP8B1O43520 1251 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 AQP8O94778 261 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 ME2P23368 584 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 IL12AP29459 219 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 LCN1P31025 176 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 HOXC12P31275 282 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 RPL3P39023 403 aaKnown RBP16.81■□□□□ 0.28
PNKP-213ENST00000599543 PRIM2P49643 509 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 GUSBP1Q15486 140 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 KRTAP21-3Q3LHN1 58 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 ZCCHC12Q6PEW1 402 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 SPATA19Q7Z5L4 167 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 ANKRD46Q86W74 232 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 MISPQ8IVT2 679 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 CLEC4FQ8N1N0 589 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 GTPBP8Q8N3Z3 284 aaPredicted RBP16.81■□□□□ 0.28
PNKP-213ENST00000599543 COQ8BQ96D53 544 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 PIK3IP1Q96FE7 263 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 NPHS2Q9NP85 383 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 UBQLN4Q9NRR5 601 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 ZCCHC3Q9NUD5 404 aaKnown RBP16.81■□□□□ 0.28
PNKP-213ENST00000599543 PAQR5Q9NXK6 330 aaPredicted RBP16.81■□□□□ 0.28
PNKP-213ENST00000599543 DCTN4Q9UJW0 460 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 MCTS1Q9ULC4 181 aaKnown RBP16.81■□□□□ 0.28
PNKP-213ENST00000599543 SNX8Q9Y5X2 465 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 GPR45Q9Y5Y3 372 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 ROS1P08922 2347 aa16.81■□□□□ 0.28
PNKP-213ENST00000599543 DSCAMO60469 2012 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 DEFB108AA8MXU0 73 aa16.8■□□□□ 0.28
PNKP-213ENST00000599543 CFLARO15519 480 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms