RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CBLN3Q6UW01 205 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 DNAJC14Q6Y2X3 702 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 LIX1LQ8IVB5 337 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 MBD3L2Q8NHZ7 208 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 PNPT1Q8TCS8 783 aaKnown RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 TRNT1Q96Q11 434 aaKnown RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 SIKE1Q9BRV8 207 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 TPT1P8Q9HAU6 139 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 KCNJ16Q9NPI9 418 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 MED17Q9NVC6 651 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 CCDC167Q9P0B6 97 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 ICAM5Q9UMF0 924 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 LIPT1Q9Y234 373 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 CARD8Q9Y2G2 431 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 WDR45Q9Y484 360 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 NBPF19A0A087WUL8 3843 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 CENPVL1A0A0U1RR11 272 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 C7orf72A4D263 438 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 NKX2-6A6NCS4 301 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 SERINC4A6NH21 518 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 CLCA1A8K7I4 914 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 SHISA8B8ZZ34 492 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 KIAA0513O60268 411 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 TNFRSF21O75509 655 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 IL2RAP01589 272 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF17P17021 662 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF41P51814 821 aaPredicted RBP15.1■□□□□ 0.01
SSBP4-204ENST00000597724 CLDN15P56746 228 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 TFF3Q07654 80 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 MAPK14Q16539 360 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 SYPL1Q16563 259 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 PLPPR5Q32ZL2 321 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 GTDC1Q4AE62 458 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 GPAT3Q53EU6 434 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 C6orf10Q5SRN2 563 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 SLC2A7Q6PXP3 512 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 FRRS1Q6ZNA5 592 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF619Q8N2I2 560 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 GTPBP8Q8N3Z3 284 aaPredicted RBP15.1■□□□□ 0.01
SSBP4-204ENST00000597724 NAXEQ8NCW5 288 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 OIT3Q8WWZ8 545 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 ZBTB8AQ96BR9 441 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 ZG16BQ96DA0 208 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 AURKBQ96GD4 344 aaPredicted RBP15.1■□□□□ 0.01
SSBP4-204ENST00000597724 NPAS1Q99742 590 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 PAIP1Q9H074 479 aaKnown RBP15.1■□□□□ 0.01
SSBP4-204ENST00000597724 CLCF1Q9UBD9 225 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 PCDHB14Q9Y5E9 798 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 AP4B1Q9Y6B7 739 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 NAV2Q8IVL1 2488 aa15.1■□□□□ 0.01
SSBP4-204ENST00000597724 A0A0G2JND7 137 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 FAM90A27PA6NNH2 459 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 H0YC42 278 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 H3BML4 177 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF264O43296 627 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 EIF4E2O60573 245 aaKnown RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 H6PDO95479 791 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 LINGO3P0C6S8 592 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 UBL4AP11441 157 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 CD1EP15812 388 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 HOXB9P17482 250 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 NCF2P19878 526 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 PSMA4P25789 261 aaKnown RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 SUCLG1P53597 346 aaKnown RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 TPD52P55327 224 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 SUMO3P55854 103 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 CLDN20P56880 219 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 CHRNEQ04844 493 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 SQLEQ14534 574 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 NDUFAF6Q330K2 333 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 AGKQ53H12 422 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 POMZP3Q6PJE2 187 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 UBQLNLQ8IYU4 475 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 MEIOBQ8N635 442 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 ANKFN1Q8N957 763 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 C9orf106Q8NAJ2 232 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 GPR119Q8TDV5 335 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 WNT2BQ93097 391 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 SPDL1Q96EA4 605 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 DOCK7Q96N67 2140 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 SLC38A1Q9H2H9 487 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 RABEP2Q9H5N1 569 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF629Q9UEG4 869 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-204ENST00000597724 TRIM33Q9UPN9 1127 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 L3MBTL1Q9Y468 752 aa15.09■□□□□ 0.01
SSBP4-204ENST00000597724 PKDREJQ9NTG1 2253 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 A0A096LPI6 279 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 NR5A2O00482 541 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 HNRNPRO43390 633 aaKnown RBP15.08■□□□□ 0
SSBP4-204ENST00000597724 NUDT14O95848 222 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 ETFAP13804 333 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 CAPN3P20807 821 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 ZNF136P52737 540 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 EEFSECP57772 596 aaKnown RBP15.08■□□□□ 0
SSBP4-204ENST00000597724 HPCAP84074 193 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 GUCY1A3Q02108 690 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 SKP2Q13309 424 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 FGFBP1Q14512 234 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 SLC25A35Q3KQZ1 300 aa15.08■□□□□ 0
SSBP4-204ENST00000597724 PAGE3Q5JUK9 113 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms