RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 NUP43Q8NFH3 380 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 OR4C3Q8NH37 302 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 CKAP2Q8WWK9 683 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 SLC9A6Q92581 669 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 OTUB1Q96FW1 271 aaPredicted RBP13.62□□□□□ -0.23
TGFB1-202ENST00000597453 NPAS1Q99742 590 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 SLCO1B3Q9NPD5 702 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 AIG1Q9NVV5 245 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 FBXO34Q9NWN3 711 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 NTMQ9P121 344 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 VDAC3Q9Y277 283 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 USH1CQ9Y6N9 552 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 NUP214P35658 2090 aaPredicted RBP13.62□□□□□ -0.23
TGFB1-202ENST00000597453 NSD1Q96L73 2696 aaPredicted RBP13.61□□□□□ -0.23
TGFB1-202ENST00000597453 RAI1Q7Z5J4 1906 aaPredicted RBP13.61□□□□□ -0.23
TGFB1-202ENST00000597453 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 ALG1L2C9J202 215 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 ZNF195O14628 629 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 EMC8O43402 210 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 AQP8O94778 261 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 OXSR1O95747 527 aaPredicted RBP13.61□□□□□ -0.23
TGFB1-202ENST00000597453 HOXC12P31275 282 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 UGT2B10P36537 528 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 PCYT1AP49585 367 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 GUSBP1Q15486 140 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 DUSP5Q16690 384 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 DPY19L1Q2PZI1 675 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 KRTAP21-3Q3LHN1 58 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 VPS26BQ4G0F5 336 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 MFSD12Q6NUT3 480 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 CXorf67Q86X51 503 aaPredicted RBP13.61□□□□□ -0.23
TGFB1-202ENST00000597453 CDRT4Q8N9R6 151 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 ZNF610Q8N9Z0 462 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 SLC16A11Q8NCK7 471 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 ACTRT2Q8TDY3 377 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 OR5P2Q8WZ92 322 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 TESCQ96BS2 214 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 C16orf58Q96GQ5 468 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 MAGEB18Q96M61 343 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 MS4A4EQ96PG1 132 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 KLHDC3Q9BQ90 382 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 DUSP26Q9BV47 211 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 DPY30Q9C005 99 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 NEUROD4Q9HD90 331 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 SIRT3Q9NTG7 399 aaPredicted RBP13.61□□□□□ -0.23
TGFB1-202ENST00000597453 AP4B1Q9Y6B7 739 aa13.61□□□□□ -0.23
TGFB1-202ENST00000597453 EIF1AYO14602 144 aaKnown RBP13.6□□□□□ -0.23
TGFB1-202ENST00000597453 NDUFB5O43674 189 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 DSCAMO60469 2012 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 KCNK2O95069 426 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 TGDSO95455 350 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 CD8BP10966 210 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 POU2F1P14859 743 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 FOSL1P15407 271 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 SLC6A8P48029 635 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 CLNS1AP54105 237 aaKnown RBP13.6□□□□□ -0.23
TGFB1-202ENST00000597453 RPS3AP61247 264 aaKnown RBP13.6□□□□□ -0.23
TGFB1-202ENST00000597453 LSM12Q3MHD2 195 aaKnown RBP13.6□□□□□ -0.23
TGFB1-202ENST00000597453 EXOSC6Q5RKV6 272 aaKnown RBP13.6□□□□□ -0.23
TGFB1-202ENST00000597453 PRR14LQ5THK1 2151 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 ZNF550Q7Z398 422 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 OR8J2Q8NGG1 315 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 PSMA8Q8TAA3 256 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 FAM110BQ8TC76 370 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 NUDT8Q8WV74 236 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 BEX4Q9NWD9 120 aaPredicted RBP13.6□□□□□ -0.23
TGFB1-202ENST00000597453 ELOVL5Q9NYP7 299 aa13.6□□□□□ -0.23
TGFB1-202ENST00000597453 E9PBE3 544 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 RNASET2O00584 256 aaKnown RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 C6orf47O95873 294 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 OPN1LWP04000 364 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 NGFRP08138 427 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 IDO1P14902 403 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 ZNF17P17021 662 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 TBXA2RP21731 343 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 CRYGSP22914 178 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 PSMA4P25789 261 aaKnown RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 EIF1AXP47813 144 aaKnown RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 KCNJ5P48544 419 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 SGCBQ16585 318 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 PGS1Q32NB8 556 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 HSP90B2PQ58FF3 399 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 CCNJQ5T5M9 372 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 NXNQ6DKJ4 435 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 PPP4R4Q6NUP7 873 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 EPGNQ6UW88 154 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 FAM214BQ7L5A3 538 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 GTPBP8Q8N3Z3 284 aaPredicted RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 FAM120BQ96EK7 910 aaKnown RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 PIK3IP1Q96FE7 263 aa13.59□□□□□ -0.23
TGFB1-202ENST00000597453 ZC3HAV1LQ96H79 300 aaKnown RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
TGFB1-202ENST00000597453 ADGRG7Q96K78 797 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms