RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ICOSLGO75144 302 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 UTS2O95399 124 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 THBS1P07996 1170 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 PABPC4LP0CB38 370 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 NPIPA8P0DM63 369 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 CYP4B1P13584 511 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 IL7RP16871 459 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 PSMA4P25789 261 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 SSTR2P30874 369 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 SOX3P41225 446 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 CLK3P49761 638 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ERFP50548 548 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 FBXW4P57775 412 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ACTR3P61158 418 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 CYBRD1Q53TN4 286 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ZNF311Q5JNZ3 666 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 AGAP7PQ5VUJ5 663 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 B3GNTL1Q67FW5 361 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 MYO7BQ6PIF6 2116 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 CBLL1Q75N03 491 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 EIF3MQ7L2H7 374 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ZAR1Q86SH2 424 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 GPALPP1Q8IXQ4 340 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 BEST3Q8N1M1 668 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 OR5M3Q8NGP4 307 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 OR52P1PQ8NH57 321 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 SPATA3Q8NHX4 192 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 PROX1Q92786 737 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 STMN2Q93045 179 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 TAMM41Q96BW9 452 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 AGAP4Q96P64 663 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 QRSL1Q9H0R6 528 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 DENND2DQ9H6A0 471 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ZBTB20Q9HC78 741 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 DCAF13Q9NV06 445 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 OLAHQ9NV23 265 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 HPF1Q9NWY4 346 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 BAG5Q9UL15 447 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ABCG2Q9UNQ0 655 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ZNF443Q9Y2A4 671 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 V9GYQ6 96 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 RTTNQ86VV8 2226 aa11.04□□□□□ -0.64
SHKBP1-213ENST00000597325 ATRQ13535 2644 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 DHRS12A0PJE2 317 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 H3BNH8 94 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 MAN1A2O60476 641 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 UGT2B11O75310 529 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 GCM2O75603 506 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 OR6B1O95007 311 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 MFN2O95140 757 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 GPIP06744 558 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 STSP08842 583 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 TBXA2RP21731 343 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 RPS4Y1P22090 263 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 PRKAR1BP31321 381 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 ATP12AP54707 1039 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 SOX8P57073 446 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 DMTNQ08495 405 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 RAPSNQ13702 412 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 CCNIQ14094 377 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 ZNF141Q15928 474 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 NTRK2Q16620 822 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 GRAMD1BQ3KR37 738 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 FAM98BQ52LJ0 330 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 PDZK1Q5T2W1 519 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 IL20RBQ6UXL0 311 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 FKBP9P1Q75LS8 142 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 NUP54Q7Z3B4 507 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 HMGN2P46Q86SG4 172 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 GOLM1Q8NBJ4 401 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 HSH2DQ96JZ2 352 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 PINK1Q9BXM7 581 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 UGT2B28Q9BY64 529 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 TBL1XR1Q9BZK7 514 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 METTL7AQ9H8H3 244 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 KLHL28Q9NXS3 571 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 B3GNT3Q9Y2A9 372 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 DTNAQ9Y4J8 743 aa11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 FLNAP21333 2647 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-213ENST00000597325 TCRBV3S1A0A5B6 114 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 UGT2B17O75795 530 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 PRKD3O94806 890 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 OXSR1O95747 527 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 C8BP07358 591 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 NGFRP08138 427 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 UMPSP11172 480 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 NID1P14543 1247 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 HOXB6P17509 224 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 ENDOUP21128 410 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 EVI2BP34910 448 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 CYB561P49447 251 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 SELENOWP63302 87 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 OC90Q02509 493 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 ZSWIM7Q19AV6 140 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF791Q3KP31 576 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 IFI44LQ53G44 452 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms