RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KRT16P08779 473 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 NID1P14543 1247 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 HPGDP15428 266 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 ATP6V1C1P21283 382 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 ZNF41P51814 821 aaPredicted RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 EEFSECP57772 596 aaKnown RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 RPS3AP61247 264 aaKnown RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 OCRLQ01968 901 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 FAM27E3Q08E93 113 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 FUT5Q11128 374 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 POU4F3Q15319 338 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 PGS1Q32NB8 556 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 SPANXN4Q5MJ08 99 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 PAMR1Q6UXH9 720 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 MTERF4Q7Z6M4 381 aaKnown RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 ANKRD46Q86W74 232 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 CHDHQ8NE62 594 aaPredicted RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 OR10D3Q8NH80 312 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 PHOSPHO1Q8TCT1 267 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 NINJ1Q92982 152 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 TESCQ96BS2 214 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 ARSGQ96EG1 525 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 TEX37Q96LM6 180 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 DPY30Q9C005 99 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 CCM2LQ9NUG4 571 aaPredicted RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 KCNE5Q9UJ90 142 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 ICAM5Q9UMF0 924 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 FAF1Q9UNN5 650 aaPredicted RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 PLEKHA6Q9Y2H5 1048 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 A0A0J9YW62 118 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 TNFSF11O14788 317 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 SIAH2O43255 324 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 CXCL13O43927 109 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 P2RX1P51575 399 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 ATP12AP54707 1039 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 CASP9P55211 416 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 EEF1A1P68104 462 aaKnown RBP11.7□□□□□ -0.54
LIG1-212ENST00000596549 STX3Q13277 289 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 TOMM34Q15785 309 aaPredicted RBP11.7□□□□□ -0.54
LIG1-212ENST00000596549 EEF1A1P5Q5VTE0 462 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 OGFOD2Q6N063 350 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 C6orf120Q7Z4R8 191 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 LRRC34Q8IZ02 419 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 OR4A15Q8NGL6 344 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 SDF2Q99470 211 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 PAIP2Q9BPZ3 127 aaKnown RBP11.7□□□□□ -0.54
LIG1-212ENST00000596549 ZNF350Q9GZX5 532 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 CXXC4Q9H2H0 198 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 AIG1Q9NVV5 245 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 CLEC4AQ9UMR7 237 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 CARD8Q9Y2G2 431 aa11.7□□□□□ -0.54
LIG1-212ENST00000596549 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
LIG1-212ENST00000596549 C9JVG2 144 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 E9PBE3 544 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 ADAMDEC1O15204 470 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 EFNA2O43921 213 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 SS18L1O75177 396 aaPredicted RBP11.69□□□□□ -0.54
LIG1-212ENST00000596549 SNNO75324 88 aaPredicted RBP11.69□□□□□ -0.54
LIG1-212ENST00000596549 NTN1O95631 604 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 CD8BP10966 210 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 FCGR2AP12318 317 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 LBPP18428 481 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 MATN1P21941 496 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 ELK4P28324 431 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 IL12AP29459 219 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 CD79BP40259 229 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 SUMO3P55854 103 aaPredicted RBP11.69□□□□□ -0.54
LIG1-212ENST00000596549 RAC1P63000 192 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 PLAURQ03405 335 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 CASP8Q14790 479 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 SGCBQ16585 318 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 PDZK1Q5T2W1 519 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 SAXO2Q658L1 398 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 ESPNLQ6ZVH7 1005 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 FAM214BQ7L5A3 538 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 WDR75Q8IWA0 830 aaKnown RBP11.69□□□□□ -0.54
LIG1-212ENST00000596549 ZNF527Q8NB42 609 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 MIPOL1Q8TD10 442 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 MGARPQ8TDB4 240 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 TLCD1Q96CP7 247 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 KLHL15Q96M94 604 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 COQ10BQ9H8M1 238 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 PLEKHF2Q9H8W4 249 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 HHATLQ9HCP6 504 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 MARCOQ9UEW3 520 aaPredicted RBP11.69□□□□□ -0.54
LIG1-212ENST00000596549 DTNAQ9Y4J8 743 aa11.69□□□□□ -0.54
LIG1-212ENST00000596549 PRAMEF27A3QJZ7 478 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 KIAA0513O60268 411 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 FCMRO60667 390 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms