RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 C5orf58C9J3I9 102 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 ENDOUP21128 410 aaKnown RBP17.56■□□□□ 0.4
PNKP-207ENST00000596014 MSX1P28360 303 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 ADH7P40394 386 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 NUDT2P50583 147 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 MRPL49Q13405 166 aaKnown RBP17.56■□□□□ 0.4
PNKP-207ENST00000596014 ZNF630Q2M218 657 aaPredicted RBP17.56■□□□□ 0.4
PNKP-207ENST00000596014 REEP3Q6NUK4 255 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 HACD2Q6Y1H2 254 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 TRILQ7L0X0 811 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 PTOV1Q86YD1 416 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 WDR60Q8WVS4 1066 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 SH3YL1Q96HL8 342 aaPredicted RBP17.56■□□□□ 0.4
PNKP-207ENST00000596014 CLPTM1LQ96KA5 538 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 ECSITQ9BQ95 431 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 PTGES2Q9H7Z7 377 aa17.56■□□□□ 0.4
PNKP-207ENST00000596014 TRGV5A0A0B4J1U4 118 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 A0A1B0GTH9 108 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 PYCARD-AS1I3L0S3 204 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 GTPBP1O00178 669 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 OIP5O43482 229 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 HCRTR2O43614 444 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 GMFGO60234 142 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 PGM3O95394 542 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 DBIP07108 87 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 RPS4Y1P22090 263 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 DPP4P27487 766 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 SRD5A2P31213 254 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 GZMMP51124 257 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ZNF117Q03924 483 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 SCARB2Q14108 478 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 FGFBP1Q14512 234 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 EIPR1Q53HC9 387 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 C8orf82Q6P1X6 216 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 CBLN3Q6UW01 205 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 YRDCQ86U90 279 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 CHERPQ8IWX8 916 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 PEX5LQ8IYB4 626 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 FAM83FQ8NEG4 500 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 B4GALNT2Q8NHY0 566 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 DTNBP1Q96EV8 351 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 HOPXQ9BPY8 73 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 SLC6A15Q9H2J7 730 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 LDAHQ9H6V9 325 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 SLC7A8Q9UHI5 535 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 CARD8Q9Y2G2 431 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 MRPS18CQ9Y3D5 142 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 L3MBTL1Q9Y468 752 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 FLNCQ14315 2725 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 A0A1B0GVC2 190 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ZNHIT1O43257 154 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ZNF264O43296 627 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 SUSD5O60279 629 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ZIC3O60481 467 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 HCN1O60741 890 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 IL7RP16871 459 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 GNLYP22749 145 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 DSCR4P56555 118 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 KCNJ10P78508 379 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 RBBP4Q09028 425 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 WIPI1Q5MNZ9 446 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 ARHGAP11AQ6P4F7 1023 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 EIF3MQ7L2H7 374 aaKnown RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 FGD2Q7Z6J4 655 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 CALHM3Q86XJ0 350 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ZZZ3Q8IYH5 903 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 DEFB107AQ8IZN7 70 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 C11orf65Q8NCR3 313 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 BBS10Q8TAM1 723 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 OR2B2Q9GZK3 357 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 PIF1Q9H611 641 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 EXO5Q9H790 373 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 TAS2R10Q9NYW0 307 aa17.55■□□□□ 0.4
PNKP-207ENST00000596014 NKX1-2Q9UD57 310 aaPredicted RBP17.55■□□□□ 0.4
PNKP-207ENST00000596014 UBR5O95071 2799 aaPredicted RBP17.54■□□□□ 0.4
PNKP-207ENST00000596014 C15orf38-AP3S2A0A0A6YYH1 394 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 CLDN24A6NM45 220 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 EIF4E2O60573 245 aaKnown RBP17.54■□□□□ 0.4
PNKP-207ENST00000596014 CSTAP01040 98 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 UBL4AP11441 157 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 UQCRFS1P47985 274 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 NDUFAF6Q330K2 333 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 C16orf89Q6UX73 402 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 ARPINQ7Z6K5 226 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 SPPL2CQ8IUH8 684 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 SLC15A3Q8IY34 581 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 OR52P1PQ8NH57 321 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 OR14L1PQ8NHC6 308 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 NEIL3Q8TAT5 605 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 C1GALT1C1Q96EU7 318 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 ZNF583Q96ND8 569 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 SPATA9Q9BWV2 254 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 CMTM6Q9NX76 183 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 DKKL1Q9UK85 242 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 ICAM5Q9UMF0 924 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 SLC35A3Q9Y2D2 325 aa17.54■□□□□ 0.4
PNKP-207ENST00000596014 FASNP49327 2511 aaKnown RBP17.53■□□□□ 0.4
PNKP-207ENST00000596014 HIVEP3Q5T1R4 2406 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms