RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FGFBP1Q14512 234 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 NRF1Q16656 503 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 LINC00303Q3SY05 128 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 IQCCQ4KMZ1 466 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 KLHL26Q53HC5 615 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 RNF220Q5VTB9 566 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 OPN5Q6U736 354 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 CCDC81Q6ZN84 652 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 ZBTB49Q6ZSB9 765 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF550Q7Z398 422 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 VASH2Q86V25 355 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 RBM45Q8IUH3 476 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 LACC1Q8IV20 430 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 SLC5A8Q8N695 610 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 OR4D11Q8NGI4 311 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 OR6T1Q8NGN1 323 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 OR5K1Q8NHB7 308 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 NRG4Q8WWG1 115 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 NR4A3Q92570 626 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 SDCCAG3Q96C92 435 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 RASL10BQ96S79 203 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 MCHR1Q99705 422 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 PIP5K1AQ99755 562 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 C9orf16Q9BUW7 83 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 NTN4Q9HB63 628 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 FLRT3Q9NZU0 649 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 SLC35A3Q9Y2D2 325 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 CHST2Q9Y4C5 530 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 TESMINQ9Y4I5 508 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 ITPR2Q14571 2701 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 CDHR4A6H8M9 788 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 G3V2T6 193 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 J3KTA2 159 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 TNFRSF11BO00300 401 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ADAMDEC1O15204 470 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ICOSLGO75144 302 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ITGA10O75578 1167 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 DNAJB5O75953 348 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 PRSS23O95084 383 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 CSTAP01040 98 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 NGFRP08138 427 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF23P17027 643 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 RRM2P31350 389 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 DNAJA1P31689 397 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ADH7P40394 386 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 MLF1P58340 268 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 Q0VFX4 171 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 CHAF1BQ13112 559 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 OGFRL1Q5TC84 451 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 FCRLBQ6BAA4 426 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 TSEN54Q7Z6J9 526 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 COMTD1Q86VU5 262 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 RANBP3LQ86VV4 465 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 HIPK1Q86Z02 1210 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ZDHHC13Q8IUH4 622 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 GRAMD2AQ8IUY3 354 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 SVOPLQ8N434 492 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 OR5M3Q8NGP4 307 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 PHOSPHO1Q8TCT1 267 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 APOBEC4Q8WW27 367 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 ASB15Q8WXK1 588 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 THAP4Q8WY91 577 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 CNOT9Q92600 299 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 THOC3Q96J01 351 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 WFDC6Q9BQY6 131 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 TBL1XR1Q9BZK7 514 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 VCXQ9H320 206 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 COQ10BQ9H8M1 238 aa11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 SAMHD1Q9Y3Z3 626 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 SPTBN1Q01082 2364 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-209ENST00000595803 A0A1W2PQD3 144 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 TP53I11O14683 189 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 FRS3O43559 492 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 NDUFB5O43674 189 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 PEX1O43933 1283 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF354AO60765 605 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 GADD45GO95257 159 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 FBXO45P0C2W1 286 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 GKN3PP0CG01 181 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 PEX2P28328 305 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 SSR4P51571 173 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 CDH12P55289 794 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 FBXW4P57775 412 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 TAS2R41P59536 307 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 RPP38P78345 283 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 FOXD4Q12950 439 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 PPP1R8Q12972 351 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 AIMP2Q13155 320 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 CLN3Q13286 438 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 GANABQ14697 944 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 MEP1AQ16819 746 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 DCAF10Q5QP82 559 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 DESI1Q6ICB0 168 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 H3F3CQ6NXT2 135 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 MARCH3Q86UD3 253 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 STK32CQ86UX6 486 aa11.97□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF440Q8IYI8 595 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms