RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
USE1-206ENST00000595101 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
USE1-206ENST00000595101 UBQLNLQ8IYU4 475 aa13.9□□□□□ -0.18
USE1-206ENST00000595101 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
USE1-206ENST00000595101 POC1BQ8TC44 478 aa13.9□□□□□ -0.18
USE1-206ENST00000595101 SLC38A5Q8WUX1 472 aa13.9□□□□□ -0.18
USE1-206ENST00000595101 TRNT1Q96Q11 434 aaKnown RBP13.9□□□□□ -0.18
USE1-206ENST00000595101 ARMCX1Q9P291 453 aa13.9□□□□□ -0.18
USE1-206ENST00000595101 PLEKHB1Q9UF11 243 aaPredicted RBP13.9□□□□□ -0.18
USE1-206ENST00000595101 H3BML4 177 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 GTPBP1O00178 669 aaKnown RBP13.89□□□□□ -0.19
USE1-206ENST00000595101 ADAM11O75078 769 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 WDR1O75083 606 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 CYP7B1O75881 506 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 ACTL6AO96019 429 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 BCHEP06276 602 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 TFPTP0C1Z6 253 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 UBTFL6P0CB48 400 aaPredicted RBP13.89□□□□□ -0.19
USE1-206ENST00000595101 NR2F1P10589 423 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 SELPLGQ14242 412 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 TMEM44Q2T9K0 475 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 ACSF3Q4G176 576 aaPredicted RBP13.89□□□□□ -0.19
USE1-206ENST00000595101 C1orf185Q5T7R7 199 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 ZNF619Q8N2I2 560 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 SDCCAG3Q96C92 435 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 FAM107BQ9H098 131 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 NDUFAF1Q9Y375 327 aa13.89□□□□□ -0.19
USE1-206ENST00000595101 EFNA2O43921 213 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 SNRPB2P08579 225 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 LINGO3P0C6S8 592 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 CPN1P15169 458 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 GRNP28799 593 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 CLDN20P56880 219 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 DSTNP60981 165 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 KLF10Q13118 480 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 SKP2Q13309 424 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 GANABQ14697 944 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 PLPPR5Q32ZL2 321 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 AAGABQ6PD74 315 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 MISPQ8IVT2 679 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 NAXEQ8NCW5 288 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 TNIP2Q8NFZ5 429 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 OR10Q1Q8NGQ4 319 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 PHF10Q8WUB8 498 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 TRIB1Q96RU8 372 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 RSPO3Q9BXY4 272 aaPredicted RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 UCK2Q9BZX2 261 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 RNF6Q9Y252 685 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 KIAA1549Q9HCM3 1950 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 LOC100653049A0A140TA62 436 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 AHRRA9YTQ3 701 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 ZNF264O43296 627 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 KRT34O76011 436 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 NUDT14O95848 222 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 CSTAP01040 98 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 UBL4AP11441 157 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 ZNF708P17019 499 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 CHMP24386 653 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 PSMA4P25789 261 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 MSX1P28360 303 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 LSP1P33241 339 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 P2RX1P51575 399 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 IRX1P78414 480 aaPredicted RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 DMTNQ08495 405 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 CAPRIN1Q14444 709 aaKnown RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 FGFBP1Q14512 234 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 ZNF630Q2M218 657 aaPredicted RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 CRYBG3Q68DQ2 2970 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 LRRC74BQ6ZQY2 392 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 LIX1LQ8IVB5 337 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 GPR119Q8TDV5 335 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 SMPDL3BQ92485 455 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 TMEM19Q96HH6 336 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 RNF145Q96MT1 663 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 PIGQQ9BRB3 760 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 SLC39A3Q9BRY0 314 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 TMEM185BQ9H7F4 350 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 POLE3Q9NRF9 147 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 Q9UFV3 132 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 LEF1Q9UJU2 399 aaPredicted RBP13.88□□□□□ -0.19
USE1-206ENST00000595101 LIPT1Q9Y234 373 aa13.88□□□□□ -0.19
USE1-206ENST00000595101 NCOA6Q14686 2063 aaPredicted RBP13.87□□□□□ -0.19
USE1-206ENST00000595101 AGAP5A6NIR3 686 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 H3BNH8 94 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 SEC14L5O43304 696 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 GABRA1P14867 456 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 DRD4P21917 467 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 PGM1P36871 562 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 CCR4P51679 360 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 KCNJ10P78508 379 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 HPCAP84074 193 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 FOXF1Q12946 379 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 RUNDC3AQ59EK9 446 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 MTFR2Q6P444 385 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 ENPP6Q6UWR7 440 aa13.87□□□□□ -0.19
USE1-206ENST00000595101 MAMDC2Q7Z304 686 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms