RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 PRG2P13727 222 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 RYKP34925 604 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 ADH7P40394 386 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 CCR4P51679 360 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 LIMK1P53667 647 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 ESRRGP62508 458 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 IL5RAQ01344 420 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 COX10Q12887 443 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 FAM69BQ5VUD6 431 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 ZNF770Q6IQ21 691 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 PGBD2Q6P3X8 592 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 NLGN4XQ8N0W4 816 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 NLGN4YQ8NFZ3 816 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 SLC22A8Q8TCC7 542 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 GRHL3Q8TE85 626 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 MESP1Q9BRJ9 268 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 DGCR6LQ9BY27 220 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 ZNF700Q9H0M5 742 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 LIN28AQ9H9Z2 209 aaKnown RBP13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 ZBTB20Q9HC78 741 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 FOXJ2Q9P0K8 574 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 ZNF223Q9UK11 482 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 TCFL5Q9UL49 500 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 NTNG1Q9Y2I2 539 aa13.72□□□□□ -0.21
GTF2F1-202ENST00000593678 A0A087WUU8 490 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 NSG1A0A0A6YYJ2 146 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 OR6C70A6NIJ9 312 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 H3BN98 237 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 WWP2O00308 870 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 ZNF264O43296 627 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 NDUFB5O43674 189 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 TSPAN2O60636 221 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 LINGO3P0C6S8 592 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 FUT4P22083 530 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 HTR2AP28223 471 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 POLR2IP36954 125 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 RPP38P78345 283 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 MYBPC1Q00872 1141 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 PCOLCEQ15113 449 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 ZNF691Q5VV52 312 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 NDUFAF7Q7L592 441 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 TMPRSS12Q86WS5 348 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 CADM2Q8N3J6 435 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 GATSQ8NAP1 163 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 TMCO6Q96DC7 493 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 FUZQ9BT04 418 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 BATF3Q9NR55 127 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 HS3ST3B1Q9Y662 390 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 HSPE1-MOB4S4R3N1 261 aa13.71□□□□□ -0.21
GTF2F1-202ENST00000593678 C21orf140B9A014 251 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 STMND1H3BQB6 276 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 PPM1BO75688 479 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 NGFRP08138 427 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 OSMP13725 252 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 CSRP1P21291 193 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 POU1F1P28069 291 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 OTX2P32243 289 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 NUP107P57740 925 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ALDH6A1Q02252 535 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 SSPNQ14714 243 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 C1orf94Q6P1W5 598 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 KLHL17Q6TDP4 642 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 TIPARPQ7Z3E1 657 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 NKAIN4Q8IVV8 208 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 APLFQ8IW19 511 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 M1APQ8TC57 530 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 MPP4Q96JB8 637 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 GPR87Q9BY21 358 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 B3GNT4Q9C0J1 378 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ZNF696Q9H7X3 374 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 EXOSC3Q9NQT5 275 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 MYOTQ9UBF9 498 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 PCDHGB5Q9Y5G0 923 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 PCDHGA6Q9Y5G7 932 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ZFHX2Q9C0A1 2572 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 A0A1W2PQD3 144 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 CHP2O43745 196 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 COX6A1P12074 109 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ICAM2P13598 275 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 NAGAP17050 411 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 SLC6A8P48029 635 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 CDC42P60953 191 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 RAPSNQ13702 412 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 BLMHQ13867 455 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ALG10BQ5I7T1 473 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 ULK3Q6PHR2 472 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 MBOAT2Q6ZWT7 520 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 RNF113BQ8IZP6 322 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 CACTIN-AS1Q8N1I8 211 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 DEPDC4Q8N2C3 294 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 LSMEM1Q8N8F7 131 aa13.7□□□□□ -0.22
GTF2F1-202ENST00000593678 TMEM255BQ8WV15 326 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms