RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CTSFQ9UBX1 484 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CHRNA9Q9UGM1 479 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 GPR132Q9UNW8 380 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SLC22A14Q9Y267 594 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SLCO1B1Q9Y6L6 691 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 MYH15Q9Y2K3 1946 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 PLXNA3P51805 1871 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 TEP1Q99973 2627 aaKnown RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 CCL15-CCL14A0A0B4J2E2 113 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 TUBAL3A6NHL2 446 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 C12orf71A8MTZ7 269 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 GOLGA8TH3BQL2 631 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FPGTO14772 594 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 CTDSPLO15194 276 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FCGR3BO75015 233 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 UFL1O94874 794 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 STBD1O95210 358 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 SEC24AO95486 1093 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 CLDN1O95832 211 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 GSRP00390 522 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 LYNP07948 512 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MAT2AP31153 395 aaKnown RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 HSD17B3P37058 310 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 GPR4P46093 362 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FNTAP49354 379 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 NUMBP49757 651 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FHITP49789 147 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MYL7Q01449 175 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MERTKQ12866 999 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 ENPP2Q13822 863 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 CCL15Q16663 113 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 PCK2Q16822 640 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 TATDN3Q17R31 274 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 PARP6Q2NL67 630 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 LRRC73Q5JTD7 316 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MLIPQ5VWP3 458 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 PLCXD3Q63HM9 321 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 TTC27Q6P3X3 843 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 TTC23LQ6PF05 361 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 SLC25A47Q6Q0C1 308 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 ENPP7Q6UWV6 458 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 BHLHA15Q7RTS1 189 aaPredicted RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 TRPM8Q7Z2W7 1104 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 LRRC6Q86X45 466 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FAM131BQ86XD5 332 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 STX12Q86Y82 276 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FAM219AQ8IW50 185 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 UBQLNLQ8IYU4 475 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FAM58AQ8N1B3 248 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 ANKRD13CQ8N6S4 541 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 KLHDC1Q8N7A1 406 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF485Q8NCK3 441 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 OR7A2PQ8NGA2 310 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 OR1L3Q8NH93 324 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 LRRC20Q8TCA0 184 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 POM121L2Q96KW2 1035 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 C4orf45Q96LM5 186 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 C10orf90Q96M02 699 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 FOXN4Q96NZ1 517 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 NPY6RQ99463 290 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 BPIFA3Q9BQP9 254 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MCRIP2Q9BUT9 160 aaKnown RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 C9orf16Q9BUW7 83 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 GTPBP2Q9BX10 602 aaKnown RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MRPL13Q9BYD1 178 aaKnown RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 DNAJC4Q9NNZ3 241 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MYOZ2Q9NPC6 264 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 NRBP2Q9NSY0 501 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 PIGVQ9NUD9 493 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MRPL22Q9NWU5 206 aaKnown RBP4.21□□□□□ -1.74
SMAD4-216ENST00000593223 IL20RAQ9UHF4 553 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 DDX19BQ9UMR2 479 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 NCKAP1Q9Y2A7 1128 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 RTL1A6NKG5 1358 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 LAMB1P07942 1786 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 TRIOO75962 3097 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 DNAH12Q6ZR08 3092 aa4.21□□□□□ -1.74
SMAD4-216ENST00000593223 MYO9BQ13459 2157 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ABCC12Q96J65 1359 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 TRAV24A0A0B4J272 114 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1W2PPK0 400 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CCDC162PA2VCL2 907 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ARHGEF35A5YM69 484 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ANTXRLA6NF34 631 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CASTOR2A6NHX0 329 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM210A6NLX4 147 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SNURFLB1AK76 121 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 WASH3PC4AMC7 463 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 LCMT2O60294 686 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 FCMRO60667 390 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ATP6V1G1O75348 118 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 DUS4LO95620 317 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 C9P02748 559 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CLTAP09496 248 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 STAG3L1P0CL83 205 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SPP1P10451 314 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 MCF2P10911 925 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 EZRP15311 586 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms