RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 U3KQV3 271 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 NSG1A0A0A6YYJ2 146 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 CDC14CA4D256 554 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 SERINC4A6NH21 518 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 OR6C70A6NIJ9 312 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 TMEM200CA6NKL6 621 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 CLDN24A6NM45 220 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 TNFRSF11BO00300 401 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 AP3D1O14617 1153 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 EI24O14681 340 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 FFAR1O14842 300 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 FMO6PO60774 539 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 GADD45GO95257 159 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 HPRP00739 348 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 SFTPCP11686 197 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 ICAM2P13598 275 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 ABCD3P28288 659 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 IL12BP29460 328 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 LIMS1P48059 325 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 HSPA13P48723 471 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 ALDH3A2P51648 485 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 AQP4P55087 323 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 CDH12P55289 794 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 RGS8P57771 180 aaPredicted RBP12.37□□□□□ -0.43
VMP1-217ENST00000593168 RPS18P62269 152 aaKnown RBP12.37□□□□□ -0.43
VMP1-217ENST00000593168 SPIBQ01892 262 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 PLCXD2Q0VAA5 305 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 DAG1Q14118 895 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 NPTX1Q15818 432 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 BTBD16Q32M84 506 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 KLHL26Q53HC5 615 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 DEF8Q6ZN54 512 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 AMER2Q8N7J2 671 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 ZNF527Q8NB42 609 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 OMA1Q96E52 524 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 ADOQ96SZ5 270 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 RBM4BQ9BQ04 359 aaKnown RBP12.37□□□□□ -0.43
VMP1-217ENST00000593168 RBM4Q9BWF3 364 aaKnown RBP12.37□□□□□ -0.43
VMP1-217ENST00000593168 DEFB126Q9BYW3 111 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 POLR2J2Q9GZM3 115 aaKnown RBP12.37□□□□□ -0.43
VMP1-217ENST00000593168 POLR2J3Q9H1A7 115 aaKnown RBP12.37□□□□□ -0.43
VMP1-217ENST00000593168 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 NPFFR2Q9Y5X5 522 aa12.37□□□□□ -0.43
VMP1-217ENST00000593168 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 LOC101059948A0A1B0GTJ6 334 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 C7orf72A4D263 438 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 HS6ST1O60243 411 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 TPST2O60704 377 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 UTS2O95399 124 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 HPP00738 406 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 ALPLP05186 524 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 H1F0P07305 194 aaKnown RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 CYP4B1P13584 511 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 HPGDP15428 266 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 ACADSP16219 412 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 ENDOUP21128 410 aaKnown RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 F8A1P23610 371 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 OTX2P32243 289 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 IFNA8P32881 189 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 ZNF136P52737 540 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 PPP2R2BQ00005 443 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 PPP1R8Q12972 351 aaKnown RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 EFR3AQ14156 821 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 CMPK2Q5EBM0 449 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 OTUD3Q5T2D3 398 aaPredicted RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 RAB43Q86YS6 212 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 OFCC1Q8IZS5 231 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 SLC15A4Q8N697 577 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 RDH12Q96NR8 316 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 MCHR1Q99705 422 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 SLC25A18Q9H1K4 315 aa12.36□□□□□ -0.43
VMP1-217ENST00000593168 LIN28AQ9H9Z2 209 aaKnown RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 NMNAT1Q9HAN9 279 aaPredicted RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 MAGED1Q9Y5V3 778 aaPredicted RBP12.36□□□□□ -0.43
VMP1-217ENST00000593168 A0A1W2PQD3 144 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 A0A1W2PRQ8 180 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ARRDC5A6NEK1 342 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 WWP2O00308 870 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 SCDO00767 359 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 FRS3O43559 492 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 PPM1BO75688 479 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 OR5F1O95221 314 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 NADKO95544 446 aaPredicted RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 OXSR1O95747 527 aaPredicted RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 TAS2R41P59536 307 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 PLAURQ03405 335 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 PIN1Q13526 163 aaPredicted RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 DGCR6Q14129 220 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 GANABQ14697 944 aaKnown RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 TAF11Q15544 211 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 MICAQ29983 383 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 EXOC3L2Q2M3D2 409 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 FNDC7Q5VTL7 733 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ZNF550Q7Z398 422 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 NUP54Q7Z3B4 507 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 431.7 ms