RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 C6orf47O95873 294 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 FGF4P08620 206 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 CCT3P49368 545 aaKnown RBP16.05■□□□□ 0.16
CIRBP-243ENST00000593128 CARD18P57730 90 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 OCRLQ01968 901 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 CTU2Q2VPK5 515 aaKnown RBP16.05■□□□□ 0.16
CIRBP-243ENST00000593128 NDUFAF6Q330K2 333 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 ESPNLQ6ZVH7 1005 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 STK32CQ86UX6 486 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 ZNF527Q8NB42 609 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 OR5AK3PQ8NH89 298 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 POC1BQ8TC44 478 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 ACTRT2Q8TDY3 377 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 OSTF1Q92882 214 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 KLHL15Q96M94 604 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 Q96MF0 132 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 PLSCR4Q9NRQ2 329 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 MKS1Q9NXB0 559 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 CARD8Q9Y2G2 431 aa16.05■□□□□ 0.16
CIRBP-243ENST00000593128 NIPBLQ6KC79 2804 aaeCLIP16.04■□□□□ 0.16
CIRBP-243ENST00000593128 H3BNH8 94 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 OIP5O43482 229 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 SHC1P29353 583 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 LCN1P31025 176 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 PCYT1AP49585 367 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 ZNF117Q03924 483 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 PGS1Q32NB8 556 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 KRTAP21-3Q3LHN1 58 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 DCST2Q5T1A1 773 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 IL23RQ5VWK5 629 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 STAC2Q6ZMT1 411 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
CIRBP-243ENST00000593128 KRTCAP2Q8N6L1 136 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 OR5P2Q8WZ92 322 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 TUBGCP3Q96CW5 907 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 ADGRG7Q96K78 797 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 PPP1R36Q96LQ0 422 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 C3orf30Q96M34 536 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 STACQ99469 402 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 ACTRT3Q9BYD9 372 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 ACTR6Q9GZN1 396 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 PIGUQ9H490 435 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 CXorf36Q9H7Y0 433 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 FANCFQ9NPI8 374 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 DUSP22Q9NRW4 184 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 ATAD3AQ9NVI7 634 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 KCNE3Q9Y6H6 103 aa16.04■□□□□ 0.16
CIRBP-243ENST00000593128 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-243ENST00000593128 C7orf72A4D263 438 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 H7C1Q1 480 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 ADAMDEC1O15204 470 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 NTN1O95631 604 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 HSPA4LO95757 839 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 THBDP07204 575 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 TUBBP07437 444 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 PSMA4P25789 261 aaKnown RBP16.03■□□□□ 0.16
CIRBP-243ENST00000593128 CCR4P51679 360 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 MLC1Q15049 377 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 LSM12Q3MHD2 195 aaKnown RBP16.03■□□□□ 0.16
CIRBP-243ENST00000593128 GTF2IRD2BQ6EKJ0 949 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 CBLN3Q6UW01 205 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 C20orf204Q6ZNR8 217 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 BEND4Q6ZU67 534 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 GTF2IRD2Q86UP8 949 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 RIBC1Q8N443 379 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-243ENST00000593128 OR56A1Q8NGH5 318 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 FBXO27Q8NI29 283 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 ABHD3Q8WU67 409 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 CAVIN3Q969G5 261 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 PRPF18Q99633 342 aaKnown RBP16.03■□□□□ 0.16
CIRBP-243ENST00000593128 PIP5K1AQ99755 562 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 TIGARQ9NQ88 270 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 GLRX2Q9NS18 164 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 ZDHHC2Q9UIJ5 367 aa16.03■□□□□ 0.16
CIRBP-243ENST00000593128 DSCAMO60469 2012 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 A0A1W2PQD3 144 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 CYP7B1O75881 506 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 KRT16P08779 473 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 LINGO3P0C6S8 592 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 PPP3CBP16298 524 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 AGTR1P30556 359 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 EIF1P41567 113 aaKnown RBP16.02■□□□□ 0.16
CIRBP-243ENST00000593128 RPS26P62854 115 aaKnown RBP16.02■□□□□ 0.16
CIRBP-243ENST00000593128 TSC22D1Q15714 1073 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 XKR7Q5GH72 579 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 BEX5Q5H9J7 111 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 TMEM201Q5SNT2 666 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 C6orf136Q5SQH8 315 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 ZNF704Q6ZNC4 412 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-243ENST00000593128 PLEKHM3Q6ZWE6 761 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 HOMEZQ8IX15 550 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 CIARTQ8N365 385 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-243ENST00000593128 OR5D16Q8NGK9 328 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.02■□□□□ 0.16
CIRBP-243ENST00000593128 PLPPR2Q96GM1 343 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 MARK4Q96L34 752 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 SRXN1Q9BYN0 137 aa16.02■□□□□ 0.16
CIRBP-243ENST00000593128 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms