RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 JADE3Q92613 823 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 HOXB13Q92826 284 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 L3HYPDHQ96EM0 354 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 TRMT61AQ96FX7 289 aaKnown RBP9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 TSSK3Q96PN8 268 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF300Q96RE9 604 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 FMO2Q99518 471 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 TRAF4Q9BUZ4 470 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 TRIM2Q9C040 744 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 ANKZF1Q9H8Y5 726 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 SIRT5Q9NXA8 310 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 TAS2R7Q9NYW3 318 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 KLHL13Q9P2N7 655 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 ING1Q9UK53 422 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 GRID1Q9ULK0 1009 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 B3GALT5Q9Y2C3 310 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 CCL27Q9Y4X3 112 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 KCNE3Q9Y6H6 103 aa9.94□□□□□ -0.82
PRKCSH-220ENST00000593104 COL6A5A8TX70 2615 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 A0A087WUV0 522 aaPredicted RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 A0A096LNT2 108 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 G3V2L1 256 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 SEC22BO75396 215 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 IGHV3-9P01782 118 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 THBS1P07996 1170 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 PYGBP11216 843 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 ADH6P28332 368 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 ETF1P62495 437 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 IRX1P78414 480 aaPredicted RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 KIAA0040Q15053 153 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 PODNL1Q6PEZ8 512 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 IL17RELQ6ZVW7 336 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 FCRLAQ7L513 359 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 ARIH2OSQ8N7S6 290 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 RFWD2Q8NHY2 731 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 PIWIL2Q8TC59 973 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 FAM110BQ8TC76 370 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 PHOSPHO1Q8TCT1 267 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 CDS1Q92903 461 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 KISS1RQ969F8 398 aaPredicted RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 ZBTB8AQ96BR9 441 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 CHMP6Q96FZ7 201 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 HS6ST2Q96MM7 605 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 ESRP2Q9H6T0 727 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 C3orf14Q9HBI5 128 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 CISD1Q9NZ45 108 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 SH3BP4Q9P0V3 963 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 GIMAP2Q9UG22 337 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 TBK1Q9UHD2 729 aa9.93□□□□□ -0.82
PRKCSH-220ENST00000593104 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.93□□□□□ -0.823e-7■□□□□ 10.2
PRKCSH-220ENST00000593104 A0A087WZY1 265 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 A0A1W2PPM1 405 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 SERTM1A2A2V5 107 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 FAM234BA2RU67 622 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 A8MV72 311 aaPredicted RBP9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF195O14628 629 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 ABCD4O14678 606 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 CRCPO75575 148 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 LY6HO94772 140 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 NUDT14O95848 222 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 SDC1P18827 310 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 ME2P23368 584 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 GSTM5P46439 218 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 MANFP55145 182 aaKnown RBP9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 CDH11P55287 796 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 LASP1Q14847 261 aaKnown RBP9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 C6orf52Q5T4I8 152 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 B3GLCTQ6Y288 498 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 TIFABQ6ZNK6 161 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 TRABD2AQ86V40 505 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 SLC22A9Q8IVM8 553 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 MMGT1Q8N4V1 131 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF614Q8N883 585 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 COX18Q8N8Q8 333 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 CDRT4Q8N9R6 151 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 MS4A4EQ96PG1 132 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 POTEKPQ9BYX7 375 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 OR10A4Q9H209 315 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 MANSC1Q9H8J5 431 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 GLRX2Q9NS18 164 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 SIRT3Q9NTG7 399 aaPredicted RBP9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 PAQR5Q9NXK6 330 aaPredicted RBP9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 NFU1Q9UMS0 254 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 CARD8Q9Y2G2 431 aa9.92□□□□□ -0.82
PRKCSH-220ENST00000593104 NUP214P35658 2090 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 C7orf72A4D263 438 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 NPIPB8E9PQR5 432 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 SCDO00767 359 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 TLX2O43763 284 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 URI1O94763 535 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 SLITRK5O94991 958 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 H6PDO95479 791 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ALOX5P09917 674 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 HPGDP15428 266 aa9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 ZNF16P17020 682 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-220ENST00000593104 IGHV1-2P23083 117 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms