RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 WDR88Q6ZMY6 472 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 DEFB128Q7Z7B8 93 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NRMQ8IXM6 262 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FAM217AQ8IXS0 508 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ZNF619Q8N2I2 560 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TTC9BQ8N6N2 239 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CELF5Q8N6W0 485 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 ZNF680Q8NEM1 530 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 OR2L5Q8NG80 312 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ELMOD3Q96FG2 381 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SIPA1Q96FS4 1042 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CASD1Q96PB1 797 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MOGAT1Q96PD6 335 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TBX5Q99593 518 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 C17orf62Q9BQA9 187 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TCEAL7Q9BRU2 100 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RBCK1Q9BYM8 510 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CXorf36Q9H7Y0 433 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 DDX31Q9H8H2 851 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 LTB4R2Q9NPC1 389 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CYSLTR2Q9NS75 346 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RLIMQ9NVW2 624 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TAS2R3Q9NYW6 316 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RGS17Q9UGC6 210 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 NDOR1Q9UHB4 597 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MUTYHQ9UIF7 546 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GJD2Q9UKL4 321 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SCML1Q9UN30 329 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MRPS23Q9Y3D9 190 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GPSM3Q9Y4H4 160 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ACTL7AQ9Y615 435 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 U3KQ87 197 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FAM221BA6H8Z2 402 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ELOA3DA6NLF2 546 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GABARAPH6UMI1 98 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NPC1O15118 1278 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FMO6PO60774 539 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PQBP1O60828 265 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 ABLIM3O94929 683 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ITGBL1O95965 494 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 ADH1BP00325 375 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SOD1P00441 154 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 HLA-DQB1P01920 261 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RLN2P04090 185 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 THBS1P07996 1170 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 AKAIN1P0CW23 69 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CALCBP10092 127 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ADH5P11766 374 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ACP5P13686 325 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NPPBP16860 134 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MMP11P24347 488 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FRKP42685 505 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GDI2P50395 445 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GATMP50440 423 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MMP15P51511 669 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CLCNKAP51800 687 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 EPHA4P54764 986 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SCAND1P57086 179 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TAS2R31P59538 309 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CDK5Q00535 292 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RASGEF1BQ0VAM2 473 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MEF2DQ14814 521 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RBMS2Q15434 407 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GPR68Q15743 365 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SSX1Q16384 188 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ELOA3BQ3SY89 546 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GLYR1Q49A26 553 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 CCSAPQ6IQ19 270 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 TCTN3Q6NUS6 607 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KCTD18Q6PI47 426 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 HAGHLQ6PII5 290 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 TMEM205Q6UW68 189 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ERN2Q76MJ5 926 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 VN1R5Q7Z5H4 357 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FAM124AQ86V42 546 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 SLC35F3Q8IY50 421 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SYS1Q8N2H4 156 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 DNAJC5GQ8N7S2 189 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KLHDC9Q8NEP7 349 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ELOA3Q8NG57 546 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TMEM239Q8WW34 195 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SMPDL3BQ92485 455 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NSMAFQ92636 917 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RELTQ969Z4 430 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GAL3ST3Q96A11 431 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RNF31Q96EP0 1072 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SAMD8Q96LT4 415 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ADAD1Q96M93 576 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 ATF6BQ99941 703 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 Q9N2J8 555 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NRIP3Q9NQ35 241 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 IFT46Q9NQC8 304 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TAS2R16Q9NYV7 291 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CLEC2DQ9UHP7 191 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PIGBOS1A0A0B4J2F0 54 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ANKRD61A6NGH8 418 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 H7BY64 318 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 M0R129 80 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GPR39O43194 453 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms