RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DNAJA1P31689 397 aaKnown RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 CPOXP36551 454 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 KIR2DL2P43627 348 aaPredicted RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 EIF1AXP47813 144 aaKnown RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 CASP9P55211 416 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 NME5P56597 212 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 DAZAP2Q15038 168 aaPredicted RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 TESK1Q15569 626 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 SGCBQ16585 318 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 CTU2Q2VPK5 515 aaKnown RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 NDUFAF6Q330K2 333 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 SPANXN4Q5MJ08 99 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 OGFOD2Q6N063 350 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 CBLN3Q6UW01 205 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 OLIG3Q7RTU3 272 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 WDR75Q8IWA0 830 aaKnown RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 ZNF614Q8N883 585 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 ZNF527Q8NB42 609 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 CHDHQ8NE62 594 aaPredicted RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 TLCD1Q96CP7 247 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 TEX37Q96LM6 180 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 SDF2Q99470 211 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 OPN3Q9H1Y3 402 aaPredicted RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 LIME1Q9H400 295 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 TMEM185BQ9H7F4 350 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 TMBIM4Q9HC24 238 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 THAP1Q9NVV9 213 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 PCDHGB4Q9UN71 923 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 CARD8Q9Y2G2 431 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 GOLGA8QA0A0J9YX86 632 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 PRSS51A0A1B0GVH4 220 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 GOLGA8OA6NCC3 632 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 C9JVG2 144 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 GOLGA8NF8WBI6 632 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 H3BNH8 94 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 MSTNO14793 375 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 CXCL13O43927 109 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 KITP10721 976 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 UQCRC2P22695 453 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 SLC6A8P48029 635 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 P2RX1P51575 399 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 CLNS1AP54105 237 aaKnown RBP12.46□□□□□ -0.41
APOC1-208ENST00000592535 SLC18A1P54219 525 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 UFM1P61960 85 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 RAC1P63000 192 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 OCRLQ01968 901 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 FOXF1Q12946 379 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 CASP8Q14790 479 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 FAM174BQ3ZCQ3 159 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 ANXA8L1Q5VT79 327 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 PPP4R4Q6NUP7 873 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 CDC20BQ86Y33 519 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 OR10D3Q8NH80 312 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 OR51I1Q9H343 314 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 WDR55Q9H6Y2 383 aaPredicted RBP12.46□□□□□ -0.41
APOC1-208ENST00000592535 AIG1Q9NVV5 245 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 STOML1Q9UBI4 398 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 ICAM5Q9UMF0 924 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 DTNAQ9Y4J8 743 aa12.46□□□□□ -0.41
APOC1-208ENST00000592535 A0A0J9YW62 118 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 CENPVL1A0A0U1RR11 272 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 SH3D21A4FU49 640 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 DUXAA6NLW8 204 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 E9PBE3 544 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 GTPBP1O00178 669 aaKnown RBP12.45□□□□□ -0.42
APOC1-208ENST00000592535 TNFSF11O14788 317 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 HDAC3O15379 428 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 FCMRO60667 390 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 NUDT14O95848 222 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 AK1P00568 194 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 CGAP01215 116 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 OR12D1P0DN82 309 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 FCGR2AP12318 317 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 EPHA3P29320 983 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 SHC1P29353 583 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 IL12AP29459 219 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 S100A3P33764 101 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 SUMO3P55854 103 aaPredicted RBP12.45□□□□□ -0.42
APOC1-208ENST00000592535 FAM27E3Q08E93 113 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 GUSBP1Q15486 140 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 GPR68Q15743 365 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 TOMM34Q15785 309 aaPredicted RBP12.45□□□□□ -0.42
APOC1-208ENST00000592535 DPY19L1Q2PZI1 675 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 ARHGAP11BQ3KRB8 267 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 PDZK1Q5T2W1 519 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 SAXO2Q658L1 398 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 ATG16L1Q676U5 607 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 HEPHL1Q6MZM0 1159 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 ZNF474Q6S9Z5 364 aaPredicted RBP12.45□□□□□ -0.42
APOC1-208ENST00000592535 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 OR2V1Q8NHB1 315 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 RFWD2Q8NHY2 731 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 MIPOL1Q8TD10 442 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 ZNF524Q96C55 264 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 NKIRAS1Q9NYS0 192 aa12.45□□□□□ -0.42
APOC1-208ENST00000592535 KCNE5Q9UJ90 142 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms